Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Smc1aQ9CU62 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Smc1aQ9CU62 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Smc1aQ9CU62 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Smc1aQ9CU62 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Smc1aQ9CU62 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.67□□□□□ -1.82
Smc1aQ9CU62 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.67□□□□□ -1.82
Smc1aQ9CU62 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Smc1aQ9CU62 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm12722-201ENSMUST00000118507 493 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm13873-201ENSMUST00000119208 427 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm14101-201ENSMUST00000121502 473 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm6762-201ENSMUST00000121769 289 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm26020-201ENSMUST00000122729 183 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm9785-202ENSMUST00000144563 593 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm22034-201ENSMUST00000157283 134 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm26349-201ENSMUST00000157530 130 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm23592-201ENSMUST00000157859 117 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm23028-201ENSMUST00000158773 265 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Mir3106-201ENSMUST00000175401 82 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm26365-201ENSMUST00000179177 94 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm27374-201ENSMUST00000183660 81 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm19177-201ENSMUST00000204520 613 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm44615-201ENSMUST00000206548 358 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm18268-201ENSMUST00000208445 943 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm45860-201ENSMUST00000212700 334 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Gm27013-202ENSMUST00000205067 1436 ntBASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Smc1aQ9CU62 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Smc1aQ9CU62 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.65□□□□□ -1.82
Smc1aQ9CU62 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm26145-201ENSMUST00000104476 127 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm12782-201ENSMUST00000117519 727 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm13803-201ENSMUST00000117547 489 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm11252-201ENSMUST00000120572 939 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm12881-201ENSMUST00000121191 203 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm23791-201ENSMUST00000122553 293 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm25490-201ENSMUST00000158734 130 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm37428-201ENSMUST00000193886 137 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm43932-201ENSMUST00000204499 52 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm7751-201ENSMUST00000212868 709 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 AC164629.1-201ENSMUST00000220250 1113 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Smc1aQ9CU62 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.65□□□□□ -1.83
Smc1aQ9CU62 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Gm23747-201ENSMUST00000104228 131 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Gm4732-201ENSMUST00000118778 473 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Gm12998-201ENSMUST00000122445 789 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Gm26100-201ENSMUST00000157245 127 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Gm44634-201ENSMUST00000206119 152 ntBASIC3.64□□□□□ -1.83
Smc1aQ9CU62 Gm18585-201ENSMUST00000215197 556 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms