Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm23879-201ENSMUST00000116874 126 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm15994-201ENSMUST00000118029 402 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm13122-201ENSMUST00000118380 453 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm12155-201ENSMUST00000121267 160 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm22514-201ENSMUST00000122547 308 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm25966-201ENSMUST00000157169 117 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm25058-201ENSMUST00000157365 128 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm24784-201ENSMUST00000157640 62 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm24240-201ENSMUST00000157785 135 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm24409-201ENSMUST00000157881 152 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm24546-201ENSMUST00000158652 102 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm17109-201ENSMUST00000163985 358 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm24819-201ENSMUST00000175094 166 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm27551-201ENSMUST00000184258 77 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm19637-201ENSMUST00000185933 579 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm28163-201ENSMUST00000187099 325 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm8745-201ENSMUST00000207846 782 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 AC173482.4-201ENSMUST00000225096 348 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm23300-201ENSMUST00000082712 125 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm25140-201ENSMUST00000083254 140 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm22740-201ENSMUST00000083439 109 ntBASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Lims1Q99JW4 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm24160-201ENSMUST00000104594 126 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm11822-201ENSMUST00000119177 415 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm7219-201ENSMUST00000119619 297 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm22718-201ENSMUST00000122701 315 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm2182-201ENSMUST00000145243 663 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm22084-201ENSMUST00000157585 105 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm25520-201ENSMUST00000158389 118 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Mir5103-201ENSMUST00000175111 79 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm26960-201ENSMUST00000182263 412 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm28118-201ENSMUST00000185957 294 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm37881-201ENSMUST00000193001 421 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm36954-201ENSMUST00000195362 363 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm19726-201ENSMUST00000205008 240 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm21937-201ENSMUST00000222825 218 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.3□□□□□ -1.72
Lims1Q99JW4 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Lims1Q99JW4 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms