Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm23332-201ENSMUST00000157424 275 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm8224-201ENSMUST00000166178 497 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm24100-201ENSMUST00000178592 79 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm24137-201ENSMUST00000180055 79 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm22391-201ENSMUST00000180356 79 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm26960-201ENSMUST00000182263 412 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm29320-201ENSMUST00000185235 615 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm29179-202ENSMUST00000186138 615 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm29448-201ENSMUST00000186675 615 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm29314-201ENSMUST00000186800 615 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm28253-202ENSMUST00000187971 615 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm29169-201ENSMUST00000189835 615 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm28098-201ENSMUST00000191361 699 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm37054-201ENSMUST00000193481 543 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm18971-201ENSMUST00000197240 374 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm19649-201ENSMUST00000201126 822 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm43440-201ENSMUST00000201957 729 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm44852-201ENSMUST00000207950 369 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 AC102369.1-201ENSMUST00000218415 373 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm29774-201ENSMUST00000219270 436 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm7240-201ENSMUST00000220769 664 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Mir28a-201ENSMUST00000083560 86 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.29□□□□□ -1.72
Pcdha9Q91Y11 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Mir551b-201ENSMUST00000102165 98 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm24951-201ENSMUST00000102182 109 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm13082-201ENSMUST00000118877 561 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm11625-201ENSMUST00000119535 296 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm7071-201ENSMUST00000120458 462 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm14574-201ENSMUST00000120644 279 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm13557-201ENSMUST00000120771 382 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm9003-201ENSMUST00000121810 482 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm22613-201ENSMUST00000122679 292 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm24850-201ENSMUST00000158029 119 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm28843-201ENSMUST00000189198 678 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm29546-201ENSMUST00000191171 678 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm43424-201ENSMUST00000200484 253 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm45614-201ENSMUST00000209994 721 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.28□□□□□ -1.72
Pcdha9Q91Y11 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm13268-201ENSMUST00000117485 433 ntBASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm15313-201ENSMUST00000119179 282 ntBASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm6797-201ENSMUST00000119440 512 ntBASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm14586-201ENSMUST00000119571 408 ntBASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm14101-201ENSMUST00000121502 473 ntBASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm7241-201ENSMUST00000159853 357 ntBASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm37495-201ENSMUST00000194590 264 ntBASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm8820-201ENSMUST00000204077 571 ntBASIC4.27□□□□□ -1.73
Pcdha9Q91Y11 Gm7039-201ENSMUST00000205138 346 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms