Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm43407-201ENSMUST00000199816 317 ntBASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 Gm19126-201ENSMUST00000207896 509 ntBASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 Gm6112-201ENSMUST00000208037 629 ntBASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 AC152979.1-201ENSMUST00000218214 289 ntBASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp7Q8R1T1 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm12646-201ENSMUST00000119144 238 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm11200-201ENSMUST00000121698 448 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm15147-201ENSMUST00000122263 483 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm24780-201ENSMUST00000157635 143 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm24784-201ENSMUST00000157640 62 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm16569-201ENSMUST00000160526 314 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm26219-201ENSMUST00000175216 71 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Mir6393-201ENSMUST00000183709 94 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm8600-201ENSMUST00000186320 905 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm28163-201ENSMUST00000187099 325 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm19326-201ENSMUST00000219818 326 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm23455-201ENSMUST00000083331 100 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm38091-201ENSMUST00000192418 3871 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp7Q8R1T1 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Mir551b-201ENSMUST00000102165 98 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm12137-201ENSMUST00000119565 346 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm13511-201ENSMUST00000121167 363 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm24745-201ENSMUST00000157840 85 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm24961-201ENSMUST00000157918 184 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm22383-201ENSMUST00000158188 327 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm25361-201ENSMUST00000179358 76 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm27694-201ENSMUST00000184740 86 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm38053-201ENSMUST00000193938 160 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Chmp7Q8R1T1 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm7219-201ENSMUST00000119619 297 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm6584-201ENSMUST00000119671 447 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm6956-201ENSMUST00000134724 546 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm24240-201ENSMUST00000157785 135 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm23581-201ENSMUST00000158531 63 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm17183-201ENSMUST00000171170 493 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm22367-201ENSMUST00000178930 132 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm27999-201ENSMUST00000183539 193 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 Gm29884-201ENSMUST00000218403 453 ntBASIC5.66□□□□□ -1.5
Chmp7Q8R1T1 AC154271.1-201ENSMUST00000224780 383 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms