Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm15267-201ENSMUST00000120888 464 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm14578-201ENSMUST00000122166 391 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm22038-201ENSMUST00000157277 242 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm22059-201ENSMUST00000157544 104 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm25655-201ENSMUST00000158465 290 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm22668-201ENSMUST00000158716 260 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm22243-201ENSMUST00000178754 120 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm38080-201ENSMUST00000194035 268 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm45651-201ENSMUST00000210857 335 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm25755-201ENSMUST00000083396 107 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Mir27a-201ENSMUST00000083510 87 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.21□□□□□ -1.74
Clrn1Q8K445 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clrn1Q8K445 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Clrn1Q8K445 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm14868-201ENSMUST00000117840 216 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm12235-201ENSMUST00000118596 170 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm13510-201ENSMUST00000118659 429 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm16569-201ENSMUST00000160526 314 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Mir7222-201ENSMUST00000183740 75 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm2950-201ENSMUST00000185530 520 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm28995-201ENSMUST00000186625 261 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm37568-201ENSMUST00000191755 364 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm38150-201ENSMUST00000192996 452 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Mir3970-201ENSMUST00000199287 90 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm18306-201ENSMUST00000207338 569 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm17766-201ENSMUST00000209223 442 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm45252-201ENSMUST00000211579 397 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm46194-201ENSMUST00000218136 320 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm46190-201ENSMUST00000219650 427 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm22423-201ENSMUST00000082861 184 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.2□□□□□ -1.74
Clrn1Q8K445 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm22676-201ENSMUST00000116972 129 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm15560-201ENSMUST00000117107 643 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm11490-201ENSMUST00000118128 272 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm14008-201ENSMUST00000120483 274 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Gm11582-201ENSMUST00000121041 236 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.19□□□□□ -1.74
Clrn1Q8K445 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms