Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.13□□□□□ -1.75
CopaQ8CIE6 Gm43853-201ENSMUST00000197162 301 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 Mir129b-201ENSMUST00000197461 65 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CopaQ8CIE6 Gm43559-201ENSMUST00000198755 466 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CopaQ8CIE6 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 AC157017.2-201ENSMUST00000218354 777 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CopaQ8CIE6 AC116589.1-201ENSMUST00000220634 327 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 AC140451.2-202ENSMUST00000226156 574 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CopaQ8CIE6 Gm22304-201ENSMUST00000082688 129 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 Mir19a-201ENSMUST00000083482 82 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CopaQ8CIE6 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CopaQ8CIE6 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CopaQ8CIE6 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CopaQ8CIE6 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CopaQ8CIE6 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CopaQ8CIE6 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.13□□□□□ -1.75
CopaQ8CIE6 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CopaQ8CIE6 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CopaQ8CIE6 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm24096-201ENSMUST00000103905 110 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm12427-201ENSMUST00000117719 302 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm13478-201ENSMUST00000118312 413 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm13082-201ENSMUST00000118877 561 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm14627-201ENSMUST00000118931 567 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm14008-201ENSMUST00000120483 274 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CopaQ8CIE6 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm22769-201ENSMUST00000158367 98 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm17155-201ENSMUST00000165969 473 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm22108-201ENSMUST00000177961 106 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm23215-201ENSMUST00000178153 121 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm24798-201ENSMUST00000179334 106 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm24306-201ENSMUST00000180229 79 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm35702-201ENSMUST00000198653 511 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm42526-201ENSMUST00000198956 393 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm44910-201ENSMUST00000208451 396 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm18774-201ENSMUST00000218269 601 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm5955-201ENSMUST00000222712 219 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 AC154747.1-201ENSMUST00000225265 239 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm24611-201ENSMUST00000083272 107 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CopaQ8CIE6 Gm42909-201ENSMUST00000196982 3619 ntBASIC4.12□□□□□ -1.75
CopaQ8CIE6 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CopaQ8CIE6 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm11429-201ENSMUST00000119089 144 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm14362-201ENSMUST00000121679 273 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm15254-201ENSMUST00000149567 273 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm23957-201ENSMUST00000157209 90 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm22314-201ENSMUST00000158007 281 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm28404-201ENSMUST00000190242 453 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm38146-201ENSMUST00000194121 1293 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm42475-201ENSMUST00000201212 295 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm45232-201ENSMUST00000207811 162 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Gm8125-201ENSMUST00000216602 738 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CopaQ8CIE6 AC156790.3-201ENSMUST00000226200 254 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 AC133176.1-201ENSMUST00000226668 219 ntBASIC4.11□□□□□ -1.75
CopaQ8CIE6 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CopaQ8CIE6 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms