Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm20701-201ENSMUST00000176082 347 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm25195-201ENSMUST00000177656 126 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm37771-201ENSMUST00000193121 265 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm42805-201ENSMUST00000196158 276 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm44118-201ENSMUST00000204665 229 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm4501-201ENSMUST00000207330 551 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm4528-201ENSMUST00000207905 551 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm45327-201ENSMUST00000211612 565 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 AC110380.1-201ENSMUST00000226987 389 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm5548-201ENSMUST00000055878 397 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23738-201ENSMUST00000082828 171 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm25876-201ENSMUST00000104329 119 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm11372-201ENSMUST00000117348 570 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm11845-201ENSMUST00000117886 327 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm5762-201ENSMUST00000119204 258 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm11625-201ENSMUST00000119535 296 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14591-201ENSMUST00000120407 518 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm14651-201ENSMUST00000147192 442 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Mir713-201ENSMUST00000178651 108 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm21241-201ENSMUST00000179551 934 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm26652-202ENSMUST00000181672 475 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm7870-201ENSMUST00000184467 616 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm28597-201ENSMUST00000187664 666 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm29389-201ENSMUST00000191562 352 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm37343-201ENSMUST00000192542 111 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm37428-201ENSMUST00000193886 137 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm5983-201ENSMUST00000197739 770 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm44425-201ENSMUST00000203739 429 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm45690-201ENSMUST00000210775 246 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm6929-201ENSMUST00000210930 468 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 AC162857.1-201ENSMUST00000226614 400 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm6776-201ENSMUST00000057752 900 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc28bQ8CEG5 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm26384-201ENSMUST00000102183 110 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23271-201ENSMUST00000104052 124 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm12814-201ENSMUST00000117091 846 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm13167-201ENSMUST00000118554 578 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm12691-201ENSMUST00000120186 456 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm23775-201ENSMUST00000158991 249 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm3111-201ENSMUST00000167426 490 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm17054-201ENSMUST00000169811 259 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm11392-201ENSMUST00000181419 710 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Mir6414-201ENSMUST00000183685 82 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm27189-201ENSMUST00000184119 190 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm37727-201ENSMUST00000191637 819 ntBASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc28bQ8CEG5 Gm20162-201ENSMUST00000193629 871 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms