Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm7299-201ENSMUST00000194441 581 ntBASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 Gm45245-201ENSMUST00000210082 376 ntBASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 Gm9309-201ENSMUST00000223537 546 ntBASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Ccdc38Q8CDN8 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm14931-201ENSMUST00000111079 253 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm13678-201ENSMUST00000118926 340 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm15719-201ENSMUST00000120619 635 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm14463-201ENSMUST00000121117 498 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm13502-201ENSMUST00000121574 684 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm16129-201ENSMUST00000152628 486 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm20648-201ENSMUST00000175815 328 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Spin2g-201ENSMUST00000178425 687 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm35570-201ENSMUST00000198730 681 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm10297-201ENSMUST00000207136 651 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm8942-201ENSMUST00000217892 400 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Snora7a-201ENSMUST00000082629 140 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm25592-201ENSMUST00000082635 131 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Gm10161-201ENSMUST00000091506 204 ntBASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc38Q8CDN8 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Ccdc38Q8CDN8 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm12149-201ENSMUST00000117511 654 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm22722-201ENSMUST00000157467 132 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm22833-201ENSMUST00000158292 132 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm22532-201ENSMUST00000158822 140 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Mir6975-201ENSMUST00000184879 61 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm38231-201ENSMUST00000192030 347 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm33571-201ENSMUST00000193271 657 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm36943-201ENSMUST00000194422 282 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm45080-201ENSMUST00000206648 283 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm45380-201ENSMUST00000210465 315 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm21007-201ENSMUST00000221024 326 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.58□□□□□ -1.84
Ccdc38Q8CDN8 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Mir1198-201ENSMUST00000116995 121 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Gm13761-201ENSMUST00000117238 807 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Gm4732-201ENSMUST00000118778 473 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Gm14877-201ENSMUST00000119803 478 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Mir8118-201ENSMUST00000183962 129 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Gm30341-201ENSMUST00000194363 289 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Gm43954-201ENSMUST00000204634 544 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Gm44554-201ENSMUST00000208738 147 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.57□□□□□ -1.84
Ccdc38Q8CDN8 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms