Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm22021-201ENSMUST00000104353 107 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm15783-201ENSMUST00000117521 633 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm11982-201ENSMUST00000121480 314 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm25325-201ENSMUST00000122559 86 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm23084-201ENSMUST00000157850 114 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm24419-201ENSMUST00000157875 332 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm25436-201ENSMUST00000158275 145 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm16566-201ENSMUST00000160387 910 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm8292-201ENSMUST00000162574 396 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm29038-201ENSMUST00000191543 678 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm45150-201ENSMUST00000206051 467 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm23627-201ENSMUST00000082459 107 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm22502-201ENSMUST00000082488 107 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm24149-201ENSMUST00000082757 107 ntBASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp40Q8BWR4 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm42768-201ENSMUST00000197734 2897 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm11781-201ENSMUST00000118328 472 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm13064-201ENSMUST00000119125 557 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm13475-201ENSMUST00000119290 234 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm12335-201ENSMUST00000119738 327 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm25827-201ENSMUST00000157089 107 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm22563-201ENSMUST00000157333 269 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm25982-201ENSMUST00000157920 101 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm22531-201ENSMUST00000158819 140 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm25670-201ENSMUST00000178423 107 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm26239-201ENSMUST00000178842 107 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm24267-201ENSMUST00000179841 107 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm7858-201ENSMUST00000190177 622 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm5731-201ENSMUST00000190969 481 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm37658-201ENSMUST00000192672 315 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm37746-201ENSMUST00000193249 198 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm37001-201ENSMUST00000193377 190 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm20162-201ENSMUST00000193629 871 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm43355-201ENSMUST00000196541 346 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 AC121898.1-201ENSMUST00000227599 288 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm24292-201ENSMUST00000082888 107 ntBASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Usp40Q8BWR4 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Usp40Q8BWR4 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.46□□□□□ -1.53
Usp40Q8BWR4 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Usp40Q8BWR4 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Usp40Q8BWR4 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
Usp40Q8BWR4 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm3030-201ENSMUST00000163410 516 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm25314-201ENSMUST00000178810 79 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm27828-201ENSMUST00000184108 119 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm27189-201ENSMUST00000184119 190 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm29097-201ENSMUST00000190273 422 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm6240-201ENSMUST00000208014 473 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm45162-201ENSMUST00000209013 618 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 AC154598.1-201ENSMUST00000227079 347 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Gm37143-201ENSMUST00000195180 3259 ntBASIC5.46□□□□□ -1.54
Usp40Q8BWR4 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms