Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.44□□□□□ -1.86
Ccdc40Q8BI79 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm42479-201ENSMUST00000198654 1356 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm22676-201ENSMUST00000116972 129 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm15282-201ENSMUST00000117707 300 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm15142-201ENSMUST00000121013 856 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm15279-201ENSMUST00000155593 288 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm22320-201ENSMUST00000157149 312 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm25981-201ENSMUST00000157921 295 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm22769-201ENSMUST00000158367 98 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm10075-201ENSMUST00000162030 545 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm24819-201ENSMUST00000175094 166 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Mir6383-201ENSMUST00000184545 116 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm37281-201ENSMUST00000192412 439 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm37732-201ENSMUST00000194377 316 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm43979-201ENSMUST00000203179 475 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm7786-201ENSMUST00000210494 436 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm20948-201ENSMUST00000211091 449 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Gm23736-201ENSMUST00000082553 75 ntBASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ccdc40Q8BI79 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm26075-201ENSMUST00000104062 121 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm12125-201ENSMUST00000117261 736 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm12268-201ENSMUST00000118398 442 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm14979-201ENSMUST00000121561 1035 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm14581-201ENSMUST00000121726 198 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm16236-201ENSMUST00000159588 379 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm20450-201ENSMUST00000173652 147 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm27773-201ENSMUST00000184087 78 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm27942-201ENSMUST00000184669 101 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm29460-201ENSMUST00000188607 714 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm17966-201ENSMUST00000193453 594 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm2710-201ENSMUST00000073196 603 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm23104-201ENSMUST00000083722 104 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.42□□□□□ -1.86
Ccdc40Q8BI79 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm8260-201ENSMUST00000119230 353 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm11414-201ENSMUST00000121795 263 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Snrpert-201ENSMUST00000121967 279 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm24720-201ENSMUST00000157518 166 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Spin2g-201ENSMUST00000178425 687 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm22910-201ENSMUST00000178568 132 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm24968-201ENSMUST00000179817 107 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm37708-201ENSMUST00000192337 895 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm4921-201ENSMUST00000219804 992 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm18026-201ENSMUST00000222789 727 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc40Q8BI79 Gm10237-201ENSMUST00000078393 273 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms