Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm10292-201ENSMUST00000183142 581 ntBASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Gm27660-201ENSMUST00000184028 208 ntBASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Gm28267-201ENSMUST00000191093 265 ntBASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Gm18403-201ENSMUST00000192907 529 ntBASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 AC192333.2-201ENSMUST00000224771 196 ntBASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Ubfd1Q78JW9 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm37195-201ENSMUST00000192006 3018 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Mir690-201ENSMUST00000102110 109 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm14282-201ENSMUST00000119484 240 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm12137-201ENSMUST00000119565 346 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm13737-201ENSMUST00000119793 232 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm15112-201ENSMUST00000120152 860 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm15037-201ENSMUST00000120358 259 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm7308-201ENSMUST00000121087 447 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm12368-201ENSMUST00000122251 434 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm22986-201ENSMUST00000122753 130 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm19503-201ENSMUST00000187109 241 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Mir129b-201ENSMUST00000197461 65 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm7099-201ENSMUST00000080066 554 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Rny3-201ENSMUST00000083011 102 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm42680-201ENSMUST00000196238 2500 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Ubfd1Q78JW9 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
Ubfd1Q78JW9 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.96□□□□□ -1.77
Ubfd1Q78JW9 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm25169-201ENSMUST00000104190 129 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm26320-201ENSMUST00000157742 306 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm9071-201ENSMUST00000165915 474 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm22398-201ENSMUST00000174941 125 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm25731-201ENSMUST00000175167 125 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm22290-201ENSMUST00000177655 107 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm22583-201ENSMUST00000178031 107 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm19126-201ENSMUST00000207896 509 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 AL603630.1-201ENSMUST00000214781 147 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm22423-201ENSMUST00000082861 184 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm24268-201ENSMUST00000082990 110 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms