Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 AC108945.1-201ENSMUST00000226477 94 ntBASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 AC166344.2-201ENSMUST00000226747 374 ntBASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Smarca1Q6PGB8 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm15060-201ENSMUST00000119550 948 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm22988-201ENSMUST00000122759 144 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm26187-201ENSMUST00000157693 101 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm23084-201ENSMUST00000157850 114 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm28785-201ENSMUST00000187478 379 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm37603-201ENSMUST00000192368 219 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm29704-201ENSMUST00000196011 253 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm7041-201ENSMUST00000201227 524 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm44475-201ENSMUST00000204041 424 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm45379-201ENSMUST00000211772 549 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Snora31-201ENSMUST00000083213 130 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm8074-201ENSMUST00000095071 252 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Smarca1Q6PGB8 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm14815-201ENSMUST00000120060 488 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm7308-201ENSMUST00000121087 447 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm22840-201ENSMUST00000158444 136 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm24666-201ENSMUST00000158937 167 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm3111-201ENSMUST00000167426 490 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm44343-201ENSMUST00000196702 90 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm17850-201ENSMUST00000210023 1154 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 AC157017.2-201ENSMUST00000218354 777 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm5175-202ENSMUST00000219699 529 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 AC156560.1-201ENSMUST00000221425 256 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 AC158521.1-201ENSMUST00000225295 660 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm23925-201ENSMUST00000082471 132 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 AC134917.1-201ENSMUST00000220517 1449 ntBASIC4.12□□□□□ -1.75
Smarca1Q6PGB8 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.11□□□□□ -1.75
Smarca1Q6PGB8 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Smarca1Q6PGB8 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Smarca1Q6PGB8 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Smarca1Q6PGB8 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Smarca1Q6PGB8 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.11□□□□□ -1.75
Smarca1Q6PGB8 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Smarca1Q6PGB8 Gm17132-201ENSMUST00000109542 1158 ntBASIC4.11□□□□□ -1.75
Smarca1Q6PGB8 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.11□□□□□ -1.75
Smarca1Q6PGB8 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms