Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm14652-201ENSMUST00000118479 235 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm11822-201ENSMUST00000119177 415 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm11481-201ENSMUST00000120069 255 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm14591-201ENSMUST00000120407 518 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm23250-201ENSMUST00000157444 267 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm26348-201ENSMUST00000157528 240 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm22219-201ENSMUST00000157562 319 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm22968-201ENSMUST00000157955 118 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm3027-201ENSMUST00000167579 451 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm3104-201ENSMUST00000171004 473 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm22859-201ENSMUST00000174978 122 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm24819-201ENSMUST00000175094 166 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm9830-201ENSMUST00000178509 357 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Mir6344-201ENSMUST00000183462 104 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm27457-201ENSMUST00000184771 156 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm19193-201ENSMUST00000190263 590 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm28467-201ENSMUST00000190981 318 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm9722-201ENSMUST00000194568 802 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm22741-201ENSMUST00000083438 165 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm14570-201ENSMUST00000119444 391 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm15212-201ENSMUST00000122403 466 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm25966-201ENSMUST00000157169 117 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm24441-201ENSMUST00000157235 281 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm24914-201ENSMUST00000157285 313 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm25341-201ENSMUST00000157461 268 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm24216-201ENSMUST00000158259 117 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm4222-201ENSMUST00000165784 470 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm20698-201ENSMUST00000175657 233 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm32033-201ENSMUST00000193483 339 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm33601-201ENSMUST00000210001 961 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm2710-201ENSMUST00000073196 603 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Mir215-201ENSMUST00000083628 112 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm23848-201ENSMUST00000083826 106 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Scaf4Q6PFF0 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm25758-201ENSMUST00000103987 129 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm13046-201ENSMUST00000117391 501 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm12782-201ENSMUST00000117519 727 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm14823-201ENSMUST00000117698 238 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm14142-201ENSMUST00000117833 296 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm12691-201ENSMUST00000120186 456 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm13488-201ENSMUST00000120419 179 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm11448-201ENSMUST00000120427 450 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm12686-201ENSMUST00000120546 397 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm22482-201ENSMUST00000122563 359 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm2182-201ENSMUST00000145243 663 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm25389-201ENSMUST00000157340 286 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm27165-201ENSMUST00000183951 232 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm29192-201ENSMUST00000190942 377 ntBASIC4.54□□□□□ -1.68
Scaf4Q6PFF0 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms