Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm37399-201ENSMUST00000195224 416 ntBASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Gm43624-201ENSMUST00000197368 180 ntBASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Gm44389-201ENSMUST00000203795 182 ntBASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Gm45660-201ENSMUST00000210267 151 ntBASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 CT009600.1-201ENSMUST00000228771 337 ntBASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Gm23650-201ENSMUST00000083355 70 ntBASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Rnf220Q6PDX6 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm15988-201ENSMUST00000118677 367 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm12872-201ENSMUST00000121835 320 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm12650-201ENSMUST00000121966 258 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm11254-201ENSMUST00000122368 653 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm25637-201ENSMUST00000157529 107 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm6240-201ENSMUST00000208014 473 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm45101-201ENSMUST00000208327 232 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm6988-201ENSMUST00000222676 375 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm25079-201ENSMUST00000082529 203 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm22365-201ENSMUST00000093750 117 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.22□□□□□ -1.73
Rnf220Q6PDX6 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Rnf220Q6PDX6 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.21□□□□□ -1.73
Rnf220Q6PDX6 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm15073-201ENSMUST00000117432 634 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm12571-201ENSMUST00000118132 243 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm11556-201ENSMUST00000120751 288 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 AA413626-201ENSMUST00000121125 494 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm11804-201ENSMUST00000121663 468 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm15147-201ENSMUST00000122263 483 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm25807-201ENSMUST00000122783 305 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm28017-201ENSMUST00000183434 126 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm19147-201ENSMUST00000199622 652 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm2522-201ENSMUST00000204280 322 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm44472-201ENSMUST00000204922 943 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm25800-201ENSMUST00000082636 134 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm24525-201ENSMUST00000082917 151 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm24045-201ENSMUST00000083113 98 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm22868-201ENSMUST00000083955 164 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Rnf220Q6PDX6 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Mir105-201ENSMUST00000104655 80 ntBASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Gm14307-201ENSMUST00000118930 291 ntBASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Gm14297-201ENSMUST00000129110 291 ntBASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Mir5110-201ENSMUST00000175537 87 ntBASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Gm27718-201ENSMUST00000183721 86 ntBASIC4.2□□□□□ -1.74
Rnf220Q6PDX6 Mir7012-201ENSMUST00000183900 64 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms