Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm14119-201ENSMUST00000119511 235 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm9043-201ENSMUST00000119677 314 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm26020-201ENSMUST00000122729 183 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm9785-202ENSMUST00000144563 593 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm25883-201ENSMUST00000157781 271 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Mir8118-201ENSMUST00000183962 129 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm37533-201ENSMUST00000193848 545 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm18433-202ENSMUST00000195682 196 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Snora70-201ENSMUST00000083047 137 ntBASIC3.55□□□□□ -1.84
Herc4Q6PAV2 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm23609-201ENSMUST00000104542 127 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm16431-201ENSMUST00000117454 431 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm23028-201ENSMUST00000158773 265 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm23505-201ENSMUST00000158989 130 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm23777-201ENSMUST00000158994 259 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm15946-201ENSMUST00000160654 423 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm22307-201ENSMUST00000180019 107 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm20574-201ENSMUST00000182867 917 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Mir7578-201ENSMUST00000183455 82 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm19253-201ENSMUST00000204279 307 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm19987-201ENSMUST00000216339 499 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm46194-201ENSMUST00000218136 320 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm25131-201ENSMUST00000082653 151 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Mir465-201ENSMUST00000093563 74 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Herc4Q6PAV2 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.54□□□□□ -1.84
Herc4Q6PAV2 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Mir667-201ENSMUST00000102441 92 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm14463-201ENSMUST00000121117 498 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm24914-201ENSMUST00000157285 313 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm20542-201ENSMUST00000174582 372 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm27374-201ENSMUST00000183660 81 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Mir7062-201ENSMUST00000185038 66 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm43704-201ENSMUST00000196164 496 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm45063-201ENSMUST00000203726 472 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm45316-201ENSMUST00000210128 162 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 AL929265.1-201ENSMUST00000213427 125 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Gm9628-201ENSMUST00000222169 725 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Herc4Q6PAV2 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Herc4Q6PAV2 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.52□□□□□ -1.85
Herc4Q6PAV2 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms