Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm43541-201ENSMUST00000197208 581 ntBASIC3.99□□□□□ -1.77
Trim27Q62158 Gm44720-201ENSMUST00000206076 260 ntBASIC3.99□□□□□ -1.77
Trim27Q62158 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.99□□□□□ -1.77
Trim27Q62158 Gm45778-201ENSMUST00000211959 153 ntBASIC3.99□□□□□ -1.77
Trim27Q62158 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.99□□□□□ -1.77
Trim27Q62158 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.99□□□□□ -1.77
Trim27Q62158 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.99□□□□□ -1.77
Trim27Q62158 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim27Q62158 n-R5s196-201ENSMUST00000083136 117 ntBASIC3.99□□□□□ -1.77
Trim27Q62158 Gm25582-201ENSMUST00000083412 110 ntBASIC3.99□□□□□ -1.77
Trim27Q62158 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.99□□□□□ -1.77
Trim27Q62158 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim27Q62158 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim27Q62158 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim27Q62158 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim27Q62158 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim27Q62158 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim27Q62158 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim27Q62158 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim27Q62158 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
Trim27Q62158 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim27Q62158 Gm26377-201ENSMUST00000102184 108 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm24096-201ENSMUST00000103905 110 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim27Q62158 Gm12149-201ENSMUST00000117511 654 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm14358-201ENSMUST00000118458 403 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm12607-201ENSMUST00000120724 493 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm11260-201ENSMUST00000121163 942 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm23463-201ENSMUST00000122468 99 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Trim27Q62158 Gm14651-201ENSMUST00000147192 442 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.98□□□□□ -1.77
Trim27Q62158 Gm22143-201ENSMUST00000157401 203 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm24768-201ENSMUST00000158512 94 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim27Q62158 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim27Q62158 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm25748-201ENSMUST00000175487 70 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm37599-201ENSMUST00000193067 489 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm37288-201ENSMUST00000193963 334 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm44824-201ENSMUST00000207021 229 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Gm8423-201ENSMUST00000211387 607 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.98□□□□□ -1.77
Trim27Q62158 AC167977.2-201ENSMUST00000225676 682 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim27Q62158 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim27Q62158 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim27Q62158 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.98□□□□□ -1.77
Trim27Q62158 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim27Q62158 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim27Q62158 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim27Q62158 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim27Q62158 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Trim27Q62158 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim27Q62158 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Trim27Q62158 Mir294-201ENSMUST00000104710 84 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Mir466n-201ENSMUST00000104798 94 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim27Q62158 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim27Q62158 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim27Q62158 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Gm27308-201ENSMUST00000184807 233 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim27Q62158 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim27Q62158 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim27Q62158 Gm44084-201ENSMUST00000203947 409 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Gm29754-201ENSMUST00000206269 358 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim27Q62158 Gm45380-201ENSMUST00000210465 315 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Gm45742-201ENSMUST00000212400 433 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 AC153646.1-201ENSMUST00000223229 1279 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim27Q62158 Gm24533-201ENSMUST00000083138 196 ntBASIC3.97□□□□□ -1.77
Trim27Q62158 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim27Q62158 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Trim27Q62158 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim27Q62158 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.96□□□□□ -1.77
Trim27Q62158 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.96□□□□□ -1.77
Trim27Q62158 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Trim27Q62158 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.96□□□□□ -1.77
Trim27Q62158 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.96□□□□□ -1.77
Trim27Q62158 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.96□□□□□ -1.77
Trim27Q62158 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.96□□□□□ -1.78
Trim27Q62158 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim27Q62158 Gm14932-201ENSMUST00000117112 453 ntBASIC3.96□□□□□ -1.78
Trim27Q62158 Gm14794-201ENSMUST00000118181 192 ntBASIC3.96□□□□□ -1.78
Trim27Q62158 Gm2005-201ENSMUST00000120759 542 ntBASIC3.96□□□□□ -1.78
Trim27Q62158 Gm23111-201ENSMUST00000122652 105 ntBASIC3.96□□□□□ -1.78
Trim27Q62158 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.96□□□□□ -1.78
Trim27Q62158 Gm26028-201ENSMUST00000158660 294 ntBASIC3.96□□□□□ -1.78
Trim27Q62158 Gm23473-201ENSMUST00000158883 116 ntBASIC3.96□□□□□ -1.78
Trim27Q62158 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms