Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm23970-201ENSMUST00000083319 107 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm26121-201ENSMUST00000083364 162 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.09□□□□□ -1.75
CtcfQ61164 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CtcfQ61164 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CtcfQ61164 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CtcfQ61164 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CtcfQ61164 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.09□□□□□ -1.76
CtcfQ61164 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
CtcfQ61164 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CtcfQ61164 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CtcfQ61164 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CtcfQ61164 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CtcfQ61164 Gm7974-201ENSMUST00000117154 408 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm5757-201ENSMUST00000117494 528 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm6071-201ENSMUST00000119561 440 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CtcfQ61164 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CtcfQ61164 Gm22219-201ENSMUST00000157562 319 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm23824-201ENSMUST00000158741 276 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Mir5127-201ENSMUST00000175295 71 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm24811-201ENSMUST00000175313 100 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm7438-201ENSMUST00000177664 639 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm7408-201ENSMUST00000178014 639 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm7386-201ENSMUST00000178020 639 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm3657-201ENSMUST00000178170 639 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm7415-201ENSMUST00000178205 639 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Mir713-201ENSMUST00000178651 108 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm7391-201ENSMUST00000178680 639 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm28412-201ENSMUST00000187243 177 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm37828-201ENSMUST00000192496 432 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm2314-201ENSMUST00000200391 586 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm43975-201ENSMUST00000203023 481 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm18540-201ENSMUST00000204025 526 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm43954-201ENSMUST00000204634 544 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.08□□□□□ -1.76
CtcfQ61164 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Gm7240-201ENSMUST00000220769 664 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.08□□□□□ -1.76
CtcfQ61164 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CtcfQ61164 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CtcfQ61164 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CtcfQ61164 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CtcfQ61164 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CtcfQ61164 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
CtcfQ61164 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CtcfQ61164 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CtcfQ61164 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CtcfQ61164 Gm16436-201ENSMUST00000121510 1607 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CtcfQ61164 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CtcfQ61164 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CtcfQ61164 Gm24951-201ENSMUST00000102182 109 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CtcfQ61164 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC4.07□□□□□ -1.76
CtcfQ61164 Gm11372-201ENSMUST00000117348 570 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Gm15087-201ENSMUST00000117465 1172 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Gm13602-201ENSMUST00000122405 493 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.07□□□□□ -1.76
CtcfQ61164 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.07□□□□□ -1.76
CtcfQ61164 Gm23032-201ENSMUST00000157995 107 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Gm22637-201ENSMUST00000158144 283 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Igkv17-134-201ENSMUST00000168310 348 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Gm27695-201ENSMUST00000184301 91 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Mir6715-201ENSMUST00000184990 57 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC4.07□□□□□ -1.76
CtcfQ61164 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CtcfQ61164 Gm7041-201ENSMUST00000201227 524 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Gm43224-201ENSMUST00000201567 898 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Gm34783-201ENSMUST00000209159 303 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.07□□□□□ -1.76
CtcfQ61164 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 AC120540.1-201ENSMUST00000221879 324 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CtcfQ61164 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CtcfQ61164 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CtcfQ61164 Gm7099-201ENSMUST00000080066 554 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Rny3-201ENSMUST00000083011 102 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CtcfQ61164 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CtcfQ61164 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.07□□□□□ -1.76
CtcfQ61164 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CtcfQ61164 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.07□□□□□ -1.76
CtcfQ61164 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CtcfQ61164 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CtcfQ61164 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CtcfQ61164 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.06□□□□□ -1.76
CtcfQ61164 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms