Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm25203-201ENSMUST00000082842 215 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Gm7133-201ENSMUST00000187797 2039 ntBASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
Trav3-1Q5R1I8 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm14652-201ENSMUST00000118479 235 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm16458-201ENSMUST00000121428 502 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm14383-201ENSMUST00000121637 386 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm25113-201ENSMUST00000157185 143 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm24783-201ENSMUST00000157639 100 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm15838-201ENSMUST00000161575 180 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm22120-201ENSMUST00000175590 70 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm37670-201ENSMUST00000193622 229 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm42502-201ENSMUST00000198550 1089 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm44355-201ENSMUST00000200417 104 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm2189-201ENSMUST00000201419 429 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm45574-201ENSMUST00000210921 331 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm8031-201ENSMUST00000213430 626 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 AC099578.1-201ENSMUST00000220147 435 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 AC167977.1-201ENSMUST00000221384 234 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm9309-201ENSMUST00000223537 546 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 AC131117.2-203ENSMUST00000225886 950 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm25628-201ENSMUST00000084002 105 ntBASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav3-1Q5R1I8 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm14125-201ENSMUST00000113442 680 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm16128-201ENSMUST00000117855 626 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm12934-201ENSMUST00000119221 343 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm15194-201ENSMUST00000120453 434 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm15272-201ENSMUST00000120865 233 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm15692-201ENSMUST00000152173 352 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm24444-201ENSMUST00000157244 308 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm26100-201ENSMUST00000157245 127 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm7335-201ENSMUST00000172475 373 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm27893-201ENSMUST00000184408 194 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm28623-201ENSMUST00000187219 192 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Trbv12-3-201ENSMUST00000192675 372 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm37097-201ENSMUST00000193676 336 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm43559-201ENSMUST00000198755 466 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm18409-202ENSMUST00000220105 529 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Gm4036-201ENSMUST00000220842 626 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 CT025538.3-201ENSMUST00000225279 3848 ntBASIC1.63□□□□□ -2.15
Trav3-1Q5R1I8 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Mir551b-201ENSMUST00000102165 98 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm22953-201ENSMUST00000116724 101 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm15268-201ENSMUST00000118845 352 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm14901-201ENSMUST00000119001 283 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm15037-201ENSMUST00000120358 259 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm24443-201ENSMUST00000157242 132 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm23602-201ENSMUST00000157258 132 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm24681-201ENSMUST00000158760 107 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm8580-201ENSMUST00000160295 464 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm17186-201ENSMUST00000171742 456 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm26141-201ENSMUST00000175299 126 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm26297-201ENSMUST00000179464 132 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm8296-201ENSMUST00000185597 524 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm21139-201ENSMUST00000186594 877 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm38201-201ENSMUST00000192143 387 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm37751-201ENSMUST00000192440 1198 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.62□□□□□ -2.15
Trav3-1Q5R1I8 Gm22711-202ENSMUST00000197029 135 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms