Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm17194-201ENSMUST00000164610 348 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Mir7047-201ENSMUST00000184595 64 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm27330-201ENSMUST00000184689 132 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm17967-201ENSMUST00000195319 647 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm44727-201ENSMUST00000204225 451 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Gm23615-201ENSMUST00000082602 65 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.35□□□□□ -2.03
Trav5d-4Q5R1F6 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm14159-201ENSMUST00000119832 451 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm14939-201ENSMUST00000120347 680 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm25807-201ENSMUST00000122783 305 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm9785-202ENSMUST00000144563 593 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm23470-201ENSMUST00000157129 120 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm25839-201ENSMUST00000158921 103 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm17187-201ENSMUST00000164622 410 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm22858-201ENSMUST00000174972 76 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Mir7578-201ENSMUST00000183455 82 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm27786-201ENSMUST00000184337 70 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm6140-201ENSMUST00000192494 966 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm43991-201ENSMUST00000203751 274 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm45072-201ENSMUST00000208673 929 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm6012-201ENSMUST00000210821 730 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm45860-201ENSMUST00000212700 334 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm18557-201ENSMUST00000218710 433 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trav5d-4Q5R1F6 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.34□□□□□ -2.04
Trav5d-4Q5R1F6 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.34□□□□□ -2.04
Trav5d-4Q5R1F6 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.34□□□□□ -2.04
Trav5d-4Q5R1F6 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
Trav5d-4Q5R1F6 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm14877-201ENSMUST00000119803 478 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 DQ267100-201ENSMUST00000122600 72 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm16373-201ENSMUST00000129517 303 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm25185-201ENSMUST00000157754 96 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm24879-201ENSMUST00000158386 143 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm24681-201ENSMUST00000158760 107 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm24876-201ENSMUST00000158780 92 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm24734-201ENSMUST00000158860 262 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm21809-201ENSMUST00000178495 468 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm27527-201ENSMUST00000183903 99 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm5268-201ENSMUST00000189212 940 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm29553-201ENSMUST00000189692 279 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm18748-201ENSMUST00000198507 622 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm45078-201ENSMUST00000205343 546 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm45316-201ENSMUST00000210128 162 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm45400-201ENSMUST00000211603 653 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 n-R5s86-201ENSMUST00000083215 119 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav5d-4Q5R1F6 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav5d-4Q5R1F6 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav5d-4Q5R1F6 Gm23577-201ENSMUST00000103950 110 ntBASIC2.32□□□□□ -2.04
Trav5d-4Q5R1F6 Gm22072-201ENSMUST00000116850 121 ntBASIC2.32□□□□□ -2.04
Trav5d-4Q5R1F6 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.32□□□□□ -2.04
Trav5d-4Q5R1F6 Gm12897-201ENSMUST00000120341 250 ntBASIC2.32□□□□□ -2.04
Trav5d-4Q5R1F6 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.32□□□□□ -2.04
Trav5d-4Q5R1F6 Gm22141-201ENSMUST00000157403 277 ntBASIC2.32□□□□□ -2.04
Trav5d-4Q5R1F6 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.32□□□□□ -2.04
Trav5d-4Q5R1F6 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.32□□□□□ -2.04
Trav5d-4Q5R1F6 Gm3370-201ENSMUST00000171785 500 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms