Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm38213-201ENSMUST00000193203 173 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm43407-201ENSMUST00000199816 317 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm6064-201ENSMUST00000203999 454 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm44058-201ENSMUST00000204335 467 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm29920-201ENSMUST00000206876 754 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm18410-201ENSMUST00000207199 577 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm2059-201ENSMUST00000212025 287 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Mir421-201ENSMUST00000083575 76 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.42□□□□□ -2.02
Trav6-3Q5R1E6 Gm36969-201ENSMUST00000194551 2809 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm43958-201ENSMUST00000204360 3544 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm25727-201ENSMUST00000104522 131 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm14898-201ENSMUST00000120202 645 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm22956-201ENSMUST00000122520 80 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm23754-201ENSMUST00000157576 63 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm7346-201ENSMUST00000169661 476 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm25026-201ENSMUST00000175017 188 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Mir5123-201ENSMUST00000177794 83 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm26297-201ENSMUST00000179464 132 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm7909-201ENSMUST00000182688 614 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm18667-201ENSMUST00000186523 484 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm29389-201ENSMUST00000191562 352 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm43070-201ENSMUST00000196938 415 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm44157-201ENSMUST00000204720 410 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm18423-201ENSMUST00000205144 1074 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 AC160865.1-201ENSMUST00000219873 151 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 CT009733.1-203ENSMUST00000224033 451 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Mir465-201ENSMUST00000093563 74 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm8074-201ENSMUST00000095071 252 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm18594-201ENSMUST00000175733 1403 ntBASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav6-3Q5R1E6 Gm44435-201ENSMUST00000204379 4119 ntBASIC2.4□□□□□ -2.02
Trav6-3Q5R1E6 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.4□□□□□ -2.02
Trav6-3Q5R1E6 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Trav6-3Q5R1E6 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Trav6-3Q5R1E6 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Trav6-3Q5R1E6 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav6-3Q5R1E6 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav6-3Q5R1E6 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trav6-3Q5R1E6 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
Trav6-3Q5R1E6 Gm14352-201ENSMUST00000119250 449 ntBASIC2.4□□□□□ -2.03
Trav6-3Q5R1E6 Gm14463-201ENSMUST00000121117 498 ntBASIC2.4□□□□□ -2.03
Trav6-3Q5R1E6 Gm23326-201ENSMUST00000157419 105 ntBASIC2.4□□□□□ -2.03
Trav6-3Q5R1E6 Gm24505-201ENSMUST00000157682 126 ntBASIC2.4□□□□□ -2.03
Trav6-3Q5R1E6 Gm15946-201ENSMUST00000160654 423 ntBASIC2.4□□□□□ -2.03
Trav6-3Q5R1E6 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms