Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.8□□□□□ -1.8
Ccdc88bQ4QRL3 Gm43440-201ENSMUST00000201957 729 ntBASIC3.8□□□□□ -1.8
Ccdc88bQ4QRL3 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.8□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Ccdc88bQ4QRL3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ccdc88bQ4QRL3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Ccdc88bQ4QRL3 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc88bQ4QRL3 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.8□□□□□ -1.8
Ccdc88bQ4QRL3 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC3.8□□□□□ -1.8
Ccdc88bQ4QRL3 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.8□□□□□ -1.8
Ccdc88bQ4QRL3 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Gm43083-201ENSMUST00000199594 476 ntBASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 AC147615.1-201ENSMUST00000218914 441 ntBASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Gm15854-201ENSMUST00000118879 808 ntBASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Gm25069-201ENSMUST00000175238 86 ntBASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Gm28724-202ENSMUST00000194218 295 ntBASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Gm37732-201ENSMUST00000194377 316 ntBASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Snord21-201ENSMUST00000082519 94 ntBASIC3.79□□□□□ -1.8
Ccdc88bQ4QRL3 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.78□□□□□ -1.8
Ccdc88bQ4QRL3 Gm15421-202ENSMUST00000118224 399 ntBASIC3.78□□□□□ -1.8
Ccdc88bQ4QRL3 Gm24757-201ENSMUST00000176987 371 ntBASIC3.78□□□□□ -1.8
Ccdc88bQ4QRL3 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC3.78□□□□□ -1.8
Ccdc88bQ4QRL3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.78□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC3.78□□□□□ -1.8
Ccdc88bQ4QRL3 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ccdc88bQ4QRL3 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.78□□□□□ -1.8
Ccdc88bQ4QRL3 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ccdc88bQ4QRL3 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
Ccdc88bQ4QRL3 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Ccdc88bQ4QRL3 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Gm24889-201ENSMUST00000104388 132 ntBASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Gm15933-201ENSMUST00000117215 616 ntBASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Gm14793-201ENSMUST00000118739 311 ntBASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Gm6444-201ENSMUST00000119611 458 ntBASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Gm22793-201ENSMUST00000157227 330 ntBASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ccdc88bQ4QRL3 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 Gm24858-201ENSMUST00000158058 323 ntBASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 Gm16569-201ENSMUST00000160526 314 ntBASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 Gm42818-201ENSMUST00000198869 987 ntBASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 Gm19252-201ENSMUST00000204705 305 ntBASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 CT009754.4-201ENSMUST00000221430 565 ntBASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc88bQ4QRL3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc88bQ4QRL3 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.75□□□□□ -1.81
Ccdc88bQ4QRL3 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc88bQ4QRL3 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc88bQ4QRL3 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc88bQ4QRL3 AC132384.11-201ENSMUST00000219676 178 ntBASIC3.75□□□□□ -1.81
Ccdc88bQ4QRL3 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Ccdc88bQ4QRL3 Gm37895-201ENSMUST00000192448 4550 ntBASIC3.75□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 Gm23424-201ENSMUST00000103889 110 ntBASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 Gm25806-201ENSMUST00000122782 122 ntBASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 Gm43925-201ENSMUST00000203498 206 ntBASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc88bQ4QRL3 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Gm22556-201ENSMUST00000157803 100 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Gm24638-201ENSMUST00000179807 132 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Mir8119-201ENSMUST00000183371 129 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Gm27608-201ENSMUST00000184822 162 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Gm2544-201ENSMUST00000222702 756 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Gm37824-201ENSMUST00000193430 3236 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Gm25910-201ENSMUST00000157620 140 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC3.73□□□□□ -1.81
Ccdc88bQ4QRL3 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms