Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm2318-201ENSMUST00000119623 639 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm11835-201ENSMUST00000120635 663 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm2005-201ENSMUST00000120759 542 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm2768-201ENSMUST00000121062 250 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm15878-201ENSMUST00000127561 306 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm23671-201ENSMUST00000157472 103 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm25334-201ENSMUST00000158036 110 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm22521-201ENSMUST00000158272 134 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm22531-201ENSMUST00000158819 140 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Mir3106-201ENSMUST00000175401 82 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm27903-201ENSMUST00000175482 126 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm7438-201ENSMUST00000177664 639 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm7408-201ENSMUST00000178014 639 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm7386-201ENSMUST00000178020 639 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm3657-201ENSMUST00000178170 639 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm7415-201ENSMUST00000178205 639 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm7398-201ENSMUST00000178589 639 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm7391-201ENSMUST00000178680 639 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm7375-201ENSMUST00000179232 639 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm3681-201ENSMUST00000179940 639 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm25873-201ENSMUST00000180317 107 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm27755-201ENSMUST00000184623 132 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm17929-201ENSMUST00000186851 627 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm5983-201ENSMUST00000197739 770 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm43171-201ENSMUST00000199882 291 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm35931-201ENSMUST00000203931 448 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm19253-201ENSMUST00000204279 307 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm45316-201ENSMUST00000210128 162 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm6929-201ENSMUST00000210930 468 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm45273-201ENSMUST00000211559 281 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm46146-201ENSMUST00000217483 346 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm46194-201ENSMUST00000218136 320 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Trim40Q3UWA4 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Mir190b-201ENSMUST00000104803 80 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm5757-201ENSMUST00000117494 528 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm11367-201ENSMUST00000117802 120 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm13627-201ENSMUST00000119700 706 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm13692-201ENSMUST00000120774 371 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm22480-201ENSMUST00000122568 128 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm22766-201ENSMUST00000158372 99 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm4540-201ENSMUST00000170669 429 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Mir713-201ENSMUST00000178651 108 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Trbv8-201ENSMUST00000194020 285 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm37817-201ENSMUST00000195276 434 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm42832-201ENSMUST00000196361 745 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm42509-201ENSMUST00000197390 781 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm44449-201ENSMUST00000203610 153 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm7380-201ENSMUST00000211599 466 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm45439-201ENSMUST00000211723 359 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm18903-201ENSMUST00000215343 480 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 AC153870.1-201ENSMUST00000219599 560 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm22265-201ENSMUST00000082947 116 ntBASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim40Q3UWA4 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trim40Q3UWA4 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms