Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm23391-201ENSMUST00000157579 104 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm25555-201ENSMUST00000158078 111 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm6395-201ENSMUST00000167639 691 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Spanxn4-201ENSMUST00000172433 424 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm5983-201ENSMUST00000197739 770 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm17893-201ENSMUST00000203017 770 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm18410-201ENSMUST00000207199 577 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm18597-201ENSMUST00000209519 694 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm16419-201ENSMUST00000221057 625 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trafd1Q3UDK1 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm24118-201ENSMUST00000103972 126 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm25168-201ENSMUST00000104189 132 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm6274-201ENSMUST00000118173 797 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm13555-201ENSMUST00000121668 319 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm12412-201ENSMUST00000121867 328 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm26020-201ENSMUST00000122729 183 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm24534-201ENSMUST00000157949 291 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Mir8118-201ENSMUST00000183962 129 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm28069-201ENSMUST00000189926 214 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm37431-201ENSMUST00000195102 111 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm18748-201ENSMUST00000198507 622 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm43142-201ENSMUST00000198670 361 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm45063-201ENSMUST00000203726 472 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trafd1Q3UDK1 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm24096-201ENSMUST00000103905 110 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm12902-201ENSMUST00000118389 322 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm13640-201ENSMUST00000118445 264 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm8080-201ENSMUST00000122046 1155 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm14253-201ENSMUST00000122112 639 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm26424-201ENSMUST00000122530 104 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm24962-201ENSMUST00000157917 109 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm17154-201ENSMUST00000165748 431 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm24520-201ENSMUST00000179510 110 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trafd1Q3UDK1 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms