Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm14771-201ENSMUST00000118249 203 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm20415-201ENSMUST00000172877 423 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm22395-201ENSMUST00000177427 96 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm26746-201ENSMUST00000181722 487 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Mir3620-201ENSMUST00000184710 61 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm28283-201ENSMUST00000185509 178 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm29045-201ENSMUST00000187278 698 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm18403-201ENSMUST00000192907 529 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm43586-201ENSMUST00000195948 310 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 CT030187.1-201ENSMUST00000220605 252 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Mecom-201ENSMUST00000061088 348 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm22508-201ENSMUST00000082772 110 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm25853-201ENSMUST00000082793 132 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm23510-201ENSMUST00000083083 163 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Mir504-201ENSMUST00000093602 79 ntBASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Usp39Q3TIX9 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm24079-201ENSMUST00000104352 132 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm14517-201ENSMUST00000119040 337 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm14731-201ENSMUST00000119216 376 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm12190-201ENSMUST00000120001 187 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm23538-201ENSMUST00000157535 101 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm22085-201ENSMUST00000158344 110 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm22859-201ENSMUST00000174978 122 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm27694-201ENSMUST00000184740 86 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm42828-201ENSMUST00000199669 469 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm45146-201ENSMUST00000207108 221 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm8785-201ENSMUST00000220259 487 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm23406-201ENSMUST00000082537 122 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm25401-201ENSMUST00000082975 106 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm25579-201ENSMUST00000083407 106 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm25008-201ENSMUST00000083809 81 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.23□□□□□ -1.73
Usp39Q3TIX9 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Mir761-201ENSMUST00000103245 76 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Mir297a-2-201ENSMUST00000103795 90 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Gm12765-201ENSMUST00000117273 615 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Gm12719-201ENSMUST00000118859 241 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Gm12646-201ENSMUST00000119144 238 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Gm14037-201ENSMUST00000120576 313 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Gm15075-201ENSMUST00000122187 477 ntBASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Usp39Q3TIX9 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms