Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm26960-201ENSMUST00000182263 412 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm32033-201ENSMUST00000193483 339 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm42566-201ENSMUST00000197120 643 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.1□□□□□ -1.75
Col8a1Q00780 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm26263-201ENSMUST00000083281 164 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col8a1Q00780 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Col8a1Q00780 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col8a1Q00780 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.1□□□□□ -1.75
Col8a1Q00780 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col8a1Q00780 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.1□□□□□ -1.75
Col8a1Q00780 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col8a1Q00780 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Col8a1Q00780 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Col8a1Q00780 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col8a1Q00780 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col8a1Q00780 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.09□□□□□ -1.75
Col8a1Q00780 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col8a1Q00780 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col8a1Q00780 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col8a1Q00780 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm23594-201ENSMUST00000104307 134 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Mir875-201ENSMUST00000104698 78 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm12423-201ENSMUST00000118334 135 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm14570-201ENSMUST00000119444 391 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm12512-201ENSMUST00000119620 217 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm14876-201ENSMUST00000120795 327 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm24507-201ENSMUST00000157683 134 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm24750-201ENSMUST00000157843 104 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm23078-201ENSMUST00000157848 148 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm22538-201ENSMUST00000158169 299 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm26219-201ENSMUST00000175216 71 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col8a1Q00780 Mir6355-201ENSMUST00000183687 106 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm29397-201ENSMUST00000185205 333 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm28263-201ENSMUST00000185884 400 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col8a1Q00780 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm19418-201ENSMUST00000197436 580 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Igkv15-102-201ENSMUST00000197885 287 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm5284-201ENSMUST00000199053 903 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm8319-201ENSMUST00000205708 641 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm45005-201ENSMUST00000206640 157 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm10237-201ENSMUST00000078393 273 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm22973-201ENSMUST00000083298 191 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm23099-201ENSMUST00000083454 139 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Mir20a-201ENSMUST00000083508 107 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Gm24031-201ENSMUST00000083930 131 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col8a1Q00780 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.09□□□□□ -1.75
Col8a1Q00780 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col8a1Q00780 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col8a1Q00780 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.09□□□□□ -1.76
Col8a1Q00780 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Col8a1Q00780 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.09□□□□□ -1.76
Col8a1Q00780 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
Col8a1Q00780 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.09□□□□□ -1.76
Col8a1Q00780 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Col8a1Q00780 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.09□□□□□ -1.76
Col8a1Q00780 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col8a1Q00780 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col8a1Q00780 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm15526-201ENSMUST00000112504 204 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm14622-201ENSMUST00000117117 468 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm5384-201ENSMUST00000120313 463 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm14287-201ENSMUST00000121060 117 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col8a1Q00780 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm24251-201ENSMUST00000157324 114 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC4.08□□□□□ -1.76
Col8a1Q00780 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col8a1Q00780 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Col8a1Q00780 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm22633-201ENSMUST00000179834 107 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm19637-201ENSMUST00000185933 579 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm9775-201ENSMUST00000189402 331 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm44609-201ENSMUST00000207157 460 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Gm44938-201ENSMUST00000208614 427 ntBASIC4.08□□□□□ -1.76
Col8a1Q00780 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms