Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Smarcc1P97496 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Smarcc1P97496 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Smarcc1P97496 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Smarcc1P97496 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.2□□□□□ -1.58
Smarcc1P97496 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.2□□□□□ -1.58
Smarcc1P97496 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm4736-201ENSMUST00000100870 380 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm6923-201ENSMUST00000118343 406 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm12053-201ENSMUST00000119022 252 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm12897-201ENSMUST00000120341 250 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm14364-201ENSMUST00000129209 267 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm26468-201ENSMUST00000158644 106 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm24675-201ENSMUST00000158757 259 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm24225-201ENSMUST00000158825 98 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Smarcc1P97496 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Smarcc1P97496 Npn2-202ENSMUST00000189275 235 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm28098-201ENSMUST00000191361 699 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm43649-201ENSMUST00000196596 391 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm43804-201ENSMUST00000198280 456 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.2□□□□□ -1.58
Smarcc1P97496 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm29884-201ENSMUST00000218403 453 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm18116-201ENSMUST00000220920 537 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm24037-201ENSMUST00000082871 180 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.2□□□□□ -1.58
Smarcc1P97496 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Smarcc1P97496 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Smarcc1P97496 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm44679-201ENSMUST00000207202 2908 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm24987-201ENSMUST00000104453 134 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm13268-201ENSMUST00000117485 433 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm14428-201ENSMUST00000120408 822 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm24534-201ENSMUST00000157949 291 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm22889-201ENSMUST00000158639 58 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Smarcc1P97496 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm22398-201ENSMUST00000174941 125 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm25731-201ENSMUST00000175167 125 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm25397-201ENSMUST00000176951 92 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm8939-201ENSMUST00000192577 964 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm8747-201ENSMUST00000195392 751 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm19418-201ENSMUST00000197436 580 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 AC132954.1-201ENSMUST00000221017 342 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 AC127270.2-201ENSMUST00000221337 247 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 AC121898.1-201ENSMUST00000227599 288 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm26056-201ENSMUST00000083043 104 ntBASIC5.19□□□□□ -1.58
Smarcc1P97496 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Smarcc1P97496 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Smarcc1P97496 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Smarcc1P97496 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Smarcc1P97496 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm23744-201ENSMUST00000104231 149 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm14987-201ENSMUST00000117820 676 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm25294-201ENSMUST00000122791 104 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Smarcc1P97496 Mir1946a-201ENSMUST00000158360 134 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm7241-201ENSMUST00000159853 357 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm25314-201ENSMUST00000178810 79 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm38019-201ENSMUST00000195133 380 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm17781-201ENSMUST00000195232 649 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm36259-201ENSMUST00000197340 392 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm42990-201ENSMUST00000199231 312 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm44879-201ENSMUST00000207007 503 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm45553-201ENSMUST00000209929 507 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 AC174082.1-201ENSMUST00000221106 307 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm23404-201ENSMUST00000082543 97 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm45804-201ENSMUST00000212137 3435 ntBASIC5.18□□□□□ -1.58
Smarcc1P97496 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Smarcc1P97496 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Smarcc1P97496 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Smarcc1P97496 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Smarcc1P97496 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Smarcc1P97496 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Smarcc1P97496 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Smarcc1P97496 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Smarcc1P97496 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.17□□□□□ -1.58
Smarcc1P97496 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Smarcc1P97496 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Smarcc1P97496 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Smarcc1P97496 Mir147-201ENSMUST00000102354 79 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms