Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm23977-201ENSMUST00000177871 74 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Mir7687-201ENSMUST00000184722 59 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm19498-201ENSMUST00000191128 331 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm32340-201ENSMUST00000192883 259 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Rfx1P48377 Gm18551-201ENSMUST00000195594 642 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm43405-201ENSMUST00000198642 337 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC5.53□□□□□ -1.52
Rfx1P48377 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.53□□□□□ -1.52
Rfx1P48377 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Rfx1P48377 Gm26446-201ENSMUST00000082455 103 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm25141-201ENSMUST00000083177 107 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm25187-201ENSMUST00000083906 133 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Rfx1P48377 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx1P48377 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Rfx1P48377 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Rfx1P48377 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx1P48377 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Rfx1P48377 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx1P48377 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx1P48377 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Rfx1P48377 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.53□□□□□ -1.52
Rfx1P48377 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rfx1P48377 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm7957-201ENSMUST00000207404 2602 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Gm25758-201ENSMUST00000103987 129 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm12235-201ENSMUST00000118596 170 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 AA413626-201ENSMUST00000121125 494 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm26373-201ENSMUST00000157833 103 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Gm22675-201ENSMUST00000158430 104 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Gm25447-201ENSMUST00000158997 128 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Gm3027-201ENSMUST00000167579 451 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Gm3104-201ENSMUST00000171004 473 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Gm27477-201ENSMUST00000184649 143 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Igkv13-64-201ENSMUST00000198143 343 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.52□□□□□ -1.53
Rfx1P48377 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Rfx1P48377 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Rfx1P48377 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Rfx1P48377 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Rfx1P48377 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Rfx1P48377 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Rfx1P48377 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Rfx1P48377 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Rfx1P48377 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Rfx1P48377 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Rfx1P48377 Gm5362-201ENSMUST00000211968 3085 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Rfx1P48377 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Rfx1P48377 Gm14753-201ENSMUST00000118503 246 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm12854-201ENSMUST00000128518 297 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.51□□□□□ -1.53
Rfx1P48377 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rfx1P48377 Gm24577-201ENSMUST00000158580 63 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm22891-201ENSMUST00000158641 164 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm7335-201ENSMUST00000172475 373 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21842-201ENSMUST00000177552 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21626-201ENSMUST00000177791 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21562-201ENSMUST00000177888 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21539-201ENSMUST00000177925 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21599-201ENSMUST00000178249 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21914-201ENSMUST00000178452 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21723-201ENSMUST00000178692 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21916-201ENSMUST00000178771 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21801-201ENSMUST00000178865 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21633-201ENSMUST00000178941 498 ntBASIC5.51□□□□□ -1.53
Rfx1P48377 Gm21821-201ENSMUST00000179646 498 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms