Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.58□□□□□ -2
Cdx2P43241 AC174082.1-201ENSMUST00000221106 307 ntBASIC2.58□□□□□ -2
Cdx2P43241 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdx2P43241 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cdx2P43241 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cdx2P43241 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.58□□□□□ -2
Cdx2P43241 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cdx2P43241 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.58□□□□□ -2
Cdx2P43241 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cdx2P43241 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.57□□□□□ -2
Cdx2P43241 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.57□□□□□ -2
Cdx2P43241 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
Cdx2P43241 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Cdx2P43241 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm24670-201ENSMUST00000104154 132 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm13210-201ENSMUST00000121483 273 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm15065-201ENSMUST00000121699 273 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.57□□□□□ -2
Cdx2P43241 Gm23470-201ENSMUST00000157129 120 ntBASIC2.57□□□□□ -2
Cdx2P43241 Mir3075-201ENSMUST00000175340 85 ntBASIC2.57□□□□□ -2
Cdx2P43241 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.57□□□□□ -2
Cdx2P43241 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm18727-201ENSMUST00000185981 553 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm5268-201ENSMUST00000189212 940 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm37007-201ENSMUST00000194234 319 ntBASIC2.57□□□□□ -2
Cdx2P43241 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.57□□□□□ -2
Cdx2P43241 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Cdx2P43241 Gm43264-201ENSMUST00000202284 325 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.57□□□□□ -2
Cdx2P43241 Gm6796-201ENSMUST00000211919 243 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm7540-201ENSMUST00000219764 926 ntBASIC2.57□□□□□ -2
Cdx2P43241 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.57□□□□□ -2
Cdx2P43241 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC2.57□□□□□ -2
Cdx2P43241 Snora23-201ENSMUST00000082517 184 ntBASIC2.57□□□□□ -2
Cdx2P43241 Gm26458-201ENSMUST00000082832 128 ntBASIC2.57□□□□□ -2
Cdx2P43241 Mir127-201ENSMUST00000093568 70 ntBASIC2.57□□□□□ -2
Cdx2P43241 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Cdx2P43241 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
Cdx2P43241 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cdx2P43241 Gm13880-201ENSMUST00000118421 474 ntBASIC2.56□□□□□ -2
Cdx2P43241 Gm16017-201ENSMUST00000119834 208 ntBASIC2.56□□□□□ -2
Cdx2P43241 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.56□□□□□ -2
Cdx2P43241 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.56□□□□□ -2
Cdx2P43241 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC2.56□□□□□ -2
Cdx2P43241 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.56□□□□□ -2
Cdx2P43241 Gm43316-201ENSMUST00000197252 1295 ntBASIC2.56□□□□□ -2
Cdx2P43241 Gm44092-201ENSMUST00000204470 258 ntBASIC2.56□□□□□ -2
Cdx2P43241 Gm4528-201ENSMUST00000207905 551 ntBASIC2.56□□□□□ -2
Cdx2P43241 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cdx2P43241 Gm18026-201ENSMUST00000222789 727 ntBASIC2.56□□□□□ -2
Cdx2P43241 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.56□□□□□ -2
Cdx2P43241 Gm23738-201ENSMUST00000082828 171 ntBASIC2.56□□□□□ -2
Cdx2P43241 Gm26064-201ENSMUST00000083381 109 ntBASIC2.56□□□□□ -2
Cdx2P43241 Gm24698-201ENSMUST00000083883 130 ntBASIC2.56□□□□□ -2
Cdx2P43241 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
Cdx2P43241 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cdx2P43241 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Cdx2P43241 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.56□□□□□ -2
Cdx2P43241 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cdx2P43241 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.55□□□□□ -2
Cdx2P43241 Gm24120-201ENSMUST00000103978 129 ntBASIC2.55□□□□□ -2
Cdx2P43241 Gm14448-201ENSMUST00000116383 210 ntBASIC2.55□□□□□ -2
Cdx2P43241 Gm22072-201ENSMUST00000116850 121 ntBASIC2.55□□□□□ -2
Cdx2P43241 Gm11943-201ENSMUST00000119473 327 ntBASIC2.55□□□□□ -2
Cdx2P43241 Gm14907-201ENSMUST00000121948 854 ntBASIC2.55□□□□□ -2
Cdx2P43241 Gm23213-201ENSMUST00000122715 313 ntBASIC2.55□□□□□ -2
Cdx2P43241 Gm22026-201ENSMUST00000122735 281 ntBASIC2.55□□□□□ -2
Cdx2P43241 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cdx2P43241 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.55□□□□□ -2
Cdx2P43241 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.55□□□□□ -2
Cdx2P43241 Gm22227-201ENSMUST00000157356 259 ntBASIC2.55□□□□□ -2
Cdx2P43241 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.55□□□□□ -2
Cdx2P43241 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cdx2P43241 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.55□□□□□ -2
Cdx2P43241 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cdx2P43241 Gm26585-201ENSMUST00000180890 630 ntBASIC2.55□□□□□ -2
Cdx2P43241 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.55□□□□□ -2
Cdx2P43241 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.55□□□□□ -2
Cdx2P43241 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.55□□□□□ -2
Cdx2P43241 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.55□□□□□ -2
Cdx2P43241 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cdx2P43241 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.55□□□□□ -2
Cdx2P43241 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Cdx2P43241 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.55□□□□□ -2
Cdx2P43241 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Cdx2P43241 Gm7204-201ENSMUST00000062591 600 ntBASIC2.55□□□□□ -2
Cdx2P43241 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cdx2P43241 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Cdx2P43241 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cdx2P43241 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Cdx2P43241 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx2P43241 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cdx2P43241 Gm6574-201ENSMUST00000120037 362 ntBASIC2.54□□□□□ -2
Cdx2P43241 Gm12001-201ENSMUST00000121727 913 ntBASIC2.54□□□□□ -2
Cdx2P43241 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC2.54□□□□□ -2
Cdx2P43241 Gm23467-201ENSMUST00000157127 159 ntBASIC2.54□□□□□ -2
Cdx2P43241 Gm23895-201ENSMUST00000158108 160 ntBASIC2.54□□□□□ -2
Cdx2P43241 Gm22534-201ENSMUST00000158173 104 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms