Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm24984-201ENSMUST00000104454 133 ntBASIC2.35□□□□□ -2.03
HttP42859 Gm26411-201ENSMUST00000157668 107 ntBASIC2.35□□□□□ -2.03
HttP42859 Gm23267-201ENSMUST00000178490 132 ntBASIC2.35□□□□□ -2.03
HttP42859 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.35□□□□□ -2.03
HttP42859 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.35□□□□□ -2.03
HttP42859 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
HttP42859 Gm12550-201ENSMUST00000118478 329 ntBASIC2.35□□□□□ -2.03
HttP42859 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.35□□□□□ -2.03
HttP42859 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC2.35□□□□□ -2.03
HttP42859 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HttP42859 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.34□□□□□ -2.03
HttP42859 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
HttP42859 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
HttP42859 Gm649-201ENSMUST00000117284 1054 ntBASIC2.34□□□□□ -2.03
HttP42859 Gm2544-201ENSMUST00000222702 756 ntBASIC2.34□□□□□ -2.03
HttP42859 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
HttP42859 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HttP42859 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
HttP42859 Gm6923-201ENSMUST00000118343 406 ntBASIC2.34□□□□□ -2.04
HttP42859 Gm11430-201ENSMUST00000121317 217 ntBASIC2.34□□□□□ -2.04
HttP42859 Gm11446-201ENSMUST00000121319 866 ntBASIC2.34□□□□□ -2.04
HttP42859 Gm22159-201ENSMUST00000158412 130 ntBASIC2.34□□□□□ -2.04
HttP42859 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.34□□□□□ -2.04
HttP42859 Gm19257-201ENSMUST00000186121 183 ntBASIC2.34□□□□□ -2.04
HttP42859 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.34□□□□□ -2.04
HttP42859 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC2.34□□□□□ -2.04
HttP42859 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
HttP42859 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
HttP42859 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HttP42859 Gm24098-201ENSMUST00000102075 109 ntBASIC2.33□□□□□ -2.04
HttP42859 Gm25381-201ENSMUST00000102078 109 ntBASIC2.33□□□□□ -2.04
HttP42859 Gm12803-201ENSMUST00000118907 821 ntBASIC2.33□□□□□ -2.04
HttP42859 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.33□□□□□ -2.04
HttP42859 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HttP42859 AC156560.3-201ENSMUST00000222978 3841 ntBASIC2.33□□□□□ -2.04
HttP42859 Gm22723-201ENSMUST00000083820 129 ntBASIC2.33□□□□□ -2.04
HttP42859 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HttP42859 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.33□□□□□ -2.04
HttP42859 Mir6985-201ENSMUST00000184641 61 ntBASIC2.33□□□□□ -2.04
HttP42859 Gm7675-201ENSMUST00000208828 686 ntBASIC2.33□□□□□ -2.04
HttP42859 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.33□□□□□ -2.04
HttP42859 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HttP42859 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HttP42859 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HttP42859 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
HttP42859 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HttP42859 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
HttP42859 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
HttP42859 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HttP42859 Gm15225-201ENSMUST00000120449 1017 ntBASIC2.33□□□□□ -2.04
HttP42859 Gm23902-201ENSMUST00000157571 134 ntBASIC2.33□□□□□ -2.04
HttP42859 Gm25161-201ENSMUST00000158913 132 ntBASIC2.33□□□□□ -2.04
HttP42859 Gm5224-201ENSMUST00000183060 350 ntBASIC2.33□□□□□ -2.04
HttP42859 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.33□□□□□ -2.04
HttP42859 Gm25202-201ENSMUST00000082838 191 ntBASIC2.33□□□□□ -2.04
HttP42859 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HttP42859 Gm22003-201ENSMUST00000101885 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24540-201ENSMUST00000177627 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25256-201ENSMUST00000177746 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22822-201ENSMUST00000177941 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Rnu6-201ENSMUST00000178023 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24753-201ENSMUST00000178183 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25829-201ENSMUST00000178275 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22092-201ENSMUST00000178290 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24486-201ENSMUST00000178420 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm23217-201ENSMUST00000178482 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm26465-201ENSMUST00000178517 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm23092-201ENSMUST00000178688 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm23269-201ENSMUST00000178701 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25709-201ENSMUST00000178844 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25547-201ENSMUST00000178877 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24722-201ENSMUST00000179017 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22969-201ENSMUST00000179018 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22129-201ENSMUST00000179034 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24873-201ENSMUST00000179101 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm23934-201ENSMUST00000179111 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25021-201ENSMUST00000179184 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22623-201ENSMUST00000179244 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25737-201ENSMUST00000179274 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22618-201ENSMUST00000179376 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24182-201ENSMUST00000179419 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24242-201ENSMUST00000179440 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25064-201ENSMUST00000179535 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm26295-201ENSMUST00000179690 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24424-201ENSMUST00000179714 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22823-201ENSMUST00000179754 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22360-201ENSMUST00000179775 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24978-201ENSMUST00000179782 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24967-201ENSMUST00000179791 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24968-201ENSMUST00000179817 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24267-201ENSMUST00000179841 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22288-201ENSMUST00000179904 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm24389-201ENSMUST00000179962 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm23410-201ENSMUST00000179967 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22307-201ENSMUST00000180019 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm22756-201ENSMUST00000180118 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm23512-201ENSMUST00000180237 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm25412-201ENSMUST00000180258 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm26058-201ENSMUST00000180294 107 ntBASIC2.32□□□□□ -2.04
HttP42859 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms