Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Sox6P40645 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sox6P40645 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sox6P40645 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sox6P40645 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sox6P40645 Gm12106-201ENSMUST00000116006 1200 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Gm6274-201ENSMUST00000118173 797 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Gm16017-201ENSMUST00000119834 208 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Gm15193-201ENSMUST00000120224 865 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Gm23886-201ENSMUST00000122684 313 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Mir7658-201ENSMUST00000184043 57 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Gm27698-201ENSMUST00000184060 249 ntBASIC2.89□□□□□ -1.95
Sox6P40645 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Sox6P40645 Gm38268-201ENSMUST00000195813 193 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sox6P40645 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.89□□□□□ -1.95
Sox6P40645 Gm36776-201ENSMUST00000207006 203 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Gm18598-201ENSMUST00000207724 597 ntBASIC2.89□□□□□ -1.95
Sox6P40645 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.89□□□□□ -1.95
Sox6P40645 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.89□□□□□ -1.95
Sox6P40645 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.89□□□□□ -1.95
Sox6P40645 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sox6P40645 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sox6P40645 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sox6P40645 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sox6P40645 Gm26203-201ENSMUST00000082911 114 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Gm22293-201ENSMUST00000083314 109 ntBASIC2.89□□□□□ -1.95
Sox6P40645 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.89□□□□□ -1.95
Sox6P40645 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sox6P40645 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sox6P40645 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sox6P40645 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Sox6P40645 Mir667-201ENSMUST00000102441 92 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Sox6P40645 Gm25728-201ENSMUST00000104525 159 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm12149-201ENSMUST00000117511 654 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm11356-201ENSMUST00000118974 192 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm14599-201ENSMUST00000120469 474 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm12881-201ENSMUST00000121191 203 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm26020-201ENSMUST00000122729 183 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm22722-201ENSMUST00000157467 132 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm22833-201ENSMUST00000158292 132 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm28534-201ENSMUST00000187744 676 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Sox6P40645 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm35262-201ENSMUST00000215133 267 ntBASIC2.88□□□□□ -1.95
Sox6P40645 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.88□□□□□ -1.95
Sox6P40645 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.88□□□□□ -1.95
Sox6P40645 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.88□□□□□ -1.95
Sox6P40645 Gm5655-201ENSMUST00000221078 901 ntBASIC2.88□□□□□ -1.95
Sox6P40645 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Sox6P40645 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Sox6P40645 Gm25202-201ENSMUST00000082838 191 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Gm22043-201ENSMUST00000082993 158 ntBASIC2.88□□□□□ -1.95
Sox6P40645 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.88□□□□□ -1.95
Sox6P40645 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
Sox6P40645 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sox6P40645 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Sox6P40645 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Sox6P40645 Gm3940-201ENSMUST00000105087 432 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm14981-201ENSMUST00000117325 943 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm11429-201ENSMUST00000119089 144 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm14554-201ENSMUST00000119548 661 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.87□□□□□ -1.95
Sox6P40645 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.87□□□□□ -1.95
Sox6P40645 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.87□□□□□ -1.95
Sox6P40645 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Sox6P40645 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.87□□□□□ -1.95
Sox6P40645 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC2.87□□□□□ -1.95
Sox6P40645 Gm26277-201ENSMUST00000157097 152 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm22792-201ENSMUST00000157225 133 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm22339-201ENSMUST00000157718 62 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm17655-201ENSMUST00000167969 255 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Sox6P40645 Gm25748-201ENSMUST00000175487 70 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm5268-201ENSMUST00000189212 940 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Npn2-202ENSMUST00000189275 235 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.87□□□□□ -1.95
Sox6P40645 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sox6P40645 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.87□□□□□ -1.95
Sox6P40645 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sox6P40645 Gm5551-201ENSMUST00000199720 690 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm18645-201ENSMUST00000209593 651 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm45742-201ENSMUST00000212400 433 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm46233-201ENSMUST00000217831 449 ntBASIC2.87□□□□□ -1.95
Sox6P40645 Gm8681-201ENSMUST00000219115 618 ntBASIC2.87□□□□□ -1.95
Sox6P40645 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms