Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Msh3P13705 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Msh3P13705 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Msh3P13705 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.66□□□□□ -1.82
Msh3P13705 Gm7407-201ENSMUST00000208301 568 ntBASIC3.66□□□□□ -1.82
Msh3P13705 Gm45778-201ENSMUST00000211959 153 ntBASIC3.66□□□□□ -1.82
Msh3P13705 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.66□□□□□ -1.82
Msh3P13705 Gm9309-201ENSMUST00000223537 546 ntBASIC3.66□□□□□ -1.82
Msh3P13705 AC108945.1-201ENSMUST00000226477 94 ntBASIC3.66□□□□□ -1.82
Msh3P13705 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.66□□□□□ -1.82
Msh3P13705 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.66□□□□□ -1.82
Msh3P13705 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Msh3P13705 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.66□□□□□ -1.82
Msh3P13705 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.66□□□□□ -1.82
Msh3P13705 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.66□□□□□ -1.82
Msh3P13705 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.66□□□□□ -1.82
Msh3P13705 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.65□□□□□ -1.82
Msh3P13705 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.65□□□□□ -1.82
Msh3P13705 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.65□□□□□ -1.82
Msh3P13705 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Msh3P13705 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Msh3P13705 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Msh3P13705 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Msh3P13705 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Msh3P13705 Gm22091-201ENSMUST00000116908 127 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm15176-201ENSMUST00000117734 135 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm15312-201ENSMUST00000118827 271 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm2318-201ENSMUST00000119623 639 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm2768-201ENSMUST00000121062 250 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm15309-201ENSMUST00000121644 240 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Msh3P13705 Gm25883-201ENSMUST00000157781 271 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm25835-201ENSMUST00000158917 144 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm6374-201ENSMUST00000159051 788 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm7438-201ENSMUST00000177664 639 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm7408-201ENSMUST00000178014 639 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm7386-201ENSMUST00000178020 639 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm25874-201ENSMUST00000178030 79 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm3657-201ENSMUST00000178170 639 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm7415-201ENSMUST00000178205 639 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm7398-201ENSMUST00000178589 639 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm7391-201ENSMUST00000178680 639 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm7375-201ENSMUST00000179232 639 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm3681-201ENSMUST00000179940 639 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Mir6926-201ENSMUST00000184562 68 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm43582-201ENSMUST00000196149 343 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm5983-201ENSMUST00000197739 770 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Msh3P13705 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.65□□□□□ -1.83
Msh3P13705 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Gm18026-201ENSMUST00000222789 727 ntBASIC3.65□□□□□ -1.83
Msh3P13705 AC144733.1-201ENSMUST00000222893 1289 ntBASIC3.65□□□□□ -1.83
Msh3P13705 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.65□□□□□ -1.83
Msh3P13705 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.65□□□□□ -1.83
Msh3P13705 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Msh3P13705 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Msh3P13705 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Msh3P13705 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Msh3P13705 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Msh3P13705 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Msh3P13705 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Msh3P13705 Gm26423-201ENSMUST00000104277 128 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Gm23530-201ENSMUST00000104564 137 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Msh3P13705 Gm15025-201ENSMUST00000118434 418 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Gm14360-201ENSMUST00000120670 393 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Msh3P13705 Gm23059-201ENSMUST00000158978 107 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Gm23152-201ENSMUST00000175322 116 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Msh3P13705 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Msh3P13705 Gm27580-201ENSMUST00000183666 149 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Mir6907-201ENSMUST00000183764 71 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Gm27308-201ENSMUST00000184807 233 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.64□□□□□ -1.83
Msh3P13705 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Msh3P13705 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.64□□□□□ -1.83
Msh3P13705 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.64□□□□□ -1.83
Msh3P13705 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.64□□□□□ -1.83
Msh3P13705 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.64□□□□□ -1.83
Msh3P13705 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.64□□□□□ -1.83
Msh3P13705 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Msh3P13705 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Gm23516-201ENSMUST00000093728 107 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Msh3P13705 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.64□□□□□ -1.83
Msh3P13705 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Msh3P13705 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Msh3P13705 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.63□□□□□ -1.83
Msh3P13705 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Msh3P13705 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Msh3P13705 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Msh3P13705 Gm13761-201ENSMUST00000117238 807 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms