Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Msx1P13297 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
Msx1P13297 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.26□□□□□ -1.57
Msx1P13297 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Msx1P13297 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.26□□□□□ -1.57
Msx1P13297 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.26□□□□□ -1.57
Msx1P13297 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Msx1P13297 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.25□□□□□ -1.57
Msx1P13297 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Msx1P13297 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
Msx1P13297 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Msx1P13297 Gm24263-201ENSMUST00000104059 107 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Gm14537-201ENSMUST00000117464 599 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC5.25□□□□□ -1.57
Msx1P13297 Gm25383-201ENSMUST00000157810 144 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Gm26354-201ENSMUST00000158221 129 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Mir6926-201ENSMUST00000184562 68 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Gm44371-201ENSMUST00000204148 467 ntBASIC5.25□□□□□ -1.57
Msx1P13297 AC155715.1-201ENSMUST00000213575 463 ntBASIC5.25□□□□□ -1.57
Msx1P13297 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.25□□□□□ -1.57
Msx1P13297 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.25□□□□□ -1.57
Msx1P13297 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Gm7093-201ENSMUST00000223004 581 ntBASIC5.25□□□□□ -1.57
Msx1P13297 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Gm26456-201ENSMUST00000082831 111 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Gm23650-201ENSMUST00000083355 70 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
Msx1P13297 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
Msx1P13297 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Msx1P13297 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Msx1P13297 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.25□□□□□ -1.57
Msx1P13297 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Msx1P13297 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Msx1P13297 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Msx1P13297 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Msx1P13297 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.24□□□□□ -1.57
Msx1P13297 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Msx1P13297 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Msx1P13297 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Msx1P13297 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC5.24□□□□□ -1.57
Msx1P13297 Gm24692-201ENSMUST00000157761 146 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Gm23546-201ENSMUST00000158211 137 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Gm24131-201ENSMUST00000158539 107 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Gm23774-201ENSMUST00000158990 131 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.24□□□□□ -1.57
Msx1P13297 Mir6963-201ENSMUST00000183535 71 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.24□□□□□ -1.57
Msx1P13297 AC192091.2-201ENSMUST00000217869 117 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.24□□□□□ -1.57
Msx1P13297 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.24□□□□□ -1.57
Msx1P13297 CT010449.1-201ENSMUST00000220624 153 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Gm19786-201ENSMUST00000222589 580 ntBASIC5.24□□□□□ -1.57
Msx1P13297 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC5.24□□□□□ -1.57
Msx1P13297 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC5.24□□□□□ -1.57
Msx1P13297 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.24□□□□□ -1.57
Msx1P13297 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Msx1P13297 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Msx1P13297 Mir30b-201ENSMUST00000083542 96 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Gm36969-201ENSMUST00000194551 2809 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Msx1P13297 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Msx1P13297 Gm3584-201ENSMUST00000173822 2565 ntBASIC5.24□□□□□ -1.57
Msx1P13297 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Msx1P13297 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Msx1P13297 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Msx1P13297 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.23□□□□□ -1.57
Msx1P13297 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
Msx1P13297 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx1P13297 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Msx1P13297 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.23□□□□□ -1.57
Msx1P13297 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Msx1P13297 Gm24951-201ENSMUST00000102182 109 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm22778-201ENSMUST00000104090 128 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm24987-201ENSMUST00000104453 134 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm12125-201ENSMUST00000117261 736 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm14304-201ENSMUST00000117272 446 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm11718-201ENSMUST00000119942 537 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm15263-201ENSMUST00000121556 642 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm23640-201ENSMUST00000157860 104 ntBASIC5.23□□□□□ -1.57
Msx1P13297 Gm27543-201ENSMUST00000183562 177 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms