Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 CT030166.2-201ENSMUST00000222021 368 ntBASIC5.19□□□□□ -1.58
RaraP11416 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.19□□□□□ -1.58
RaraP11416 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.19□□□□□ -1.58
RaraP11416 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RaraP11416 Mir496a-201ENSMUST00000093627 79 ntBASIC5.19□□□□□ -1.58
RaraP11416 Gm26329-201ENSMUST00000093723 110 ntBASIC5.19□□□□□ -1.58
RaraP11416 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RaraP11416 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RaraP11416 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RaraP11416 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.19□□□□□ -1.58
RaraP11416 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RaraP11416 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RaraP11416 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
RaraP11416 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.18□□□□□ -1.58
RaraP11416 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.18□□□□□ -1.58
RaraP11416 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
RaraP11416 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.18□□□□□ -1.58
RaraP11416 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RaraP11416 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RaraP11416 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RaraP11416 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RaraP11416 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RaraP11416 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RaraP11416 n-R5s202-201ENSMUST00000104517 114 ntBASIC5.18□□□□□ -1.58
RaraP11416 Gm11576-201ENSMUST00000117433 417 ntBASIC5.18□□□□□ -1.58
RaraP11416 Gm14890-201ENSMUST00000117660 676 ntBASIC5.18□□□□□ -1.58
RaraP11416 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.18□□□□□ -1.58
RaraP11416 Gm22849-201ENSMUST00000157713 307 ntBASIC5.18□□□□□ -1.58
RaraP11416 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RaraP11416 Gm3851-201ENSMUST00000168653 318 ntBASIC5.18□□□□□ -1.58
RaraP11416 Gm27492-201ENSMUST00000185194 187 ntBASIC5.18□□□□□ -1.58
RaraP11416 Gm44648-201ENSMUST00000208267 329 ntBASIC5.18□□□□□ -1.58
RaraP11416 Gm3086-202ENSMUST00000221248 310 ntBASIC5.18□□□□□ -1.58
RaraP11416 Gm10088-201ENSMUST00000074116 423 ntBASIC5.18□□□□□ -1.58
RaraP11416 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.18□□□□□ -1.58
RaraP11416 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.18□□□□□ -1.58
RaraP11416 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.18□□□□□ -1.58
RaraP11416 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RaraP11416 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.18□□□□□ -1.58
RaraP11416 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
RaraP11416 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RaraP11416 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RaraP11416 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RaraP11416 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RaraP11416 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RaraP11416 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RaraP11416 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RaraP11416 Mir667-201ENSMUST00000102441 92 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm14868-201ENSMUST00000117840 216 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm15745-201ENSMUST00000119807 115 ntBASIC5.17□□□□□ -1.58
RaraP11416 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm11804-201ENSMUST00000121663 468 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm8880-201ENSMUST00000121800 454 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm22482-201ENSMUST00000122563 359 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RaraP11416 Gm24909-201ENSMUST00000157290 280 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm23120-201ENSMUST00000157654 287 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm23855-201ENSMUST00000158377 135 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm23700-201ENSMUST00000158842 102 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm3191-201ENSMUST00000167139 346 ntBASIC5.17□□□□□ -1.58
RaraP11416 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RaraP11416 Gm29668-201ENSMUST00000187802 315 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm42643-201ENSMUST00000200504 279 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm44795-201ENSMUST00000205496 319 ntBASIC5.17□□□□□ -1.58
RaraP11416 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm18602-201ENSMUST00000209794 851 ntBASIC5.17□□□□□ -1.58
RaraP11416 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.17□□□□□ -1.58
RaraP11416 AC154603.1-201ENSMUST00000224355 313 ntBASIC5.17□□□□□ -1.58
RaraP11416 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RaraP11416 Gm23514-201ENSMUST00000082827 130 ntBASIC5.17□□□□□ -1.58
RaraP11416 n-R5s50-201ENSMUST00000083168 111 ntBASIC5.17□□□□□ -1.58
RaraP11416 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RaraP11416 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RaraP11416 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.17□□□□□ -1.58
RaraP11416 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.17□□□□□ -1.58
RaraP11416 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.17□□□□□ -1.58
RaraP11416 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.17□□□□□ -1.58
RaraP11416 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RaraP11416 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RaraP11416 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
RaraP11416 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RaraP11416 CT009510.2-203ENSMUST00000226704 2136 ntBASIC5.17□□□□□ -1.58
RaraP11416 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RaraP11416 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RaraP11416 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.16□□□□□ -1.58
RaraP11416 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.16□□□□□ -1.58
RaraP11416 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RaraP11416 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.16□□□□□ -1.58
RaraP11416 Gm22273-201ENSMUST00000104040 132 ntBASIC5.16□□□□□ -1.58
RaraP11416 Gm11550-201ENSMUST00000118210 699 ntBASIC5.16□□□□□ -1.58
RaraP11416 Gm13887-201ENSMUST00000119009 344 ntBASIC5.16□□□□□ -1.58
RaraP11416 Gm15807-201ENSMUST00000119880 1128 ntBASIC5.16□□□□□ -1.58
RaraP11416 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RaraP11416 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.16□□□□□ -1.58
RaraP11416 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.16□□□□□ -1.58
RaraP11416 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC5.16□□□□□ -1.58
RaraP11416 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC5.16□□□□□ -1.58
RaraP11416 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.16□□□□□ -1.58
RaraP11416 Gm25624-201ENSMUST00000157222 275 ntBASIC5.16□□□□□ -1.58
RaraP11416 Gm8214-201ENSMUST00000172123 351 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms