Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Lire1P11260 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Lire1P11260 Gm8231-201ENSMUST00000221617 783 ntBASIC3.5□□□□□ -1.85
Lire1P11260 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.5□□□□□ -1.85
Lire1P11260 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.5□□□□□ -1.85
Lire1P11260 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.5□□□□□ -1.85
Lire1P11260 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Lire1P11260 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Lire1P11260 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Lire1P11260 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Lire1P11260 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Lire1P11260 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Lire1P11260 Gm15783-201ENSMUST00000117521 633 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm13085-201ENSMUST00000118356 171 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm14669-201ENSMUST00000118841 250 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm13603-201ENSMUST00000119404 83 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm12640-201ENSMUST00000120097 310 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm12155-201ENSMUST00000121267 160 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm23387-201ENSMUST00000158586 107 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.49□□□□□ -1.85
Lire1P11260 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Lire1P11260 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm24757-201ENSMUST00000176987 371 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Lire1P11260 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.49□□□□□ -1.85
Lire1P11260 Mir6371-201ENSMUST00000184470 111 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Lire1P11260 Gm38075-201ENSMUST00000191979 920 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm37213-201ENSMUST00000193077 586 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm19030-201ENSMUST00000194947 552 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm44476-201ENSMUST00000196225 91 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.49□□□□□ -1.85
Lire1P11260 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Lire1P11260 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.49□□□□□ -1.85
Lire1P11260 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.49□□□□□ -1.85
Lire1P11260 Gm24254-201ENSMUST00000083702 104 ntBASIC3.49□□□□□ -1.85
Lire1P11260 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Lire1P11260 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Lire1P11260 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Lire1P11260 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Lire1P11260 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
Lire1P11260 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.48□□□□□ -1.85
Lire1P11260 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Lire1P11260 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Lire1P11260 Gm23133-201ENSMUST00000104255 135 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm24987-201ENSMUST00000104453 134 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm8569-201ENSMUST00000117630 647 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm22480-201ENSMUST00000122568 128 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.48□□□□□ -1.85
Lire1P11260 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.48□□□□□ -1.85
Lire1P11260 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Lire1P11260 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Lire1P11260 Gm5967-201ENSMUST00000172723 494 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm24925-201ENSMUST00000178157 107 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm29288-201ENSMUST00000191582 901 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm37343-201ENSMUST00000192542 111 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm31520-201ENSMUST00000203048 733 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm45912-201ENSMUST00000210646 543 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.48□□□□□ -1.85
Lire1P11260 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.48□□□□□ -1.85
Lire1P11260 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.48□□□□□ -1.85
Lire1P11260 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm23518-201ENSMUST00000082835 153 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Gm22740-201ENSMUST00000083439 109 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Mir370-201ENSMUST00000083499 79 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Mir421-201ENSMUST00000083575 76 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Lire1P11260 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.48□□□□□ -1.85
Lire1P11260 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Lire1P11260 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Lire1P11260 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.47□□□□□ -1.85
Lire1P11260 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Lire1P11260 Gm24890-201ENSMUST00000104389 102 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm14448-201ENSMUST00000116383 210 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm14687-201ENSMUST00000120206 363 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm12276-201ENSMUST00000121709 301 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Lire1P11260 Gm24552-201ENSMUST00000158646 103 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.47□□□□□ -1.85
Lire1P11260 Gm16290-201ENSMUST00000161175 474 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Lire1P11260 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
Lire1P11260 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm27582-201ENSMUST00000184084 126 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.47□□□□□ -1.85
Lire1P11260 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.47□□□□□ -1.85
Lire1P11260 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Lire1P11260 Gm43991-201ENSMUST00000203751 274 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.47□□□□□ -1.85
Lire1P11260 Gm44657-201ENSMUST00000208568 450 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm45553-201ENSMUST00000209929 507 ntBASIC3.47□□□□□ -1.85
Lire1P11260 Gm45245-201ENSMUST00000210082 376 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms