Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm14677-201ENSMUST00000117866 486 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Gm12268-201ENSMUST00000118398 442 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Gm14901-201ENSMUST00000119001 283 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Gm7634-201ENSMUST00000185778 553 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Gm37684-201ENSMUST00000192779 355 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Gm43217-201ENSMUST00000199513 367 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Gm10780-201ENSMUST00000099459 285 ntBASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Chmp6P0C0A3 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Chmp6P0C0A3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm7853-201ENSMUST00000100708 478 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Mir667-201ENSMUST00000102441 92 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm22939-201ENSMUST00000103958 131 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm12803-201ENSMUST00000118907 821 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm16017-201ENSMUST00000119834 208 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm7071-201ENSMUST00000120458 462 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm22776-201ENSMUST00000178634 94 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm23767-201ENSMUST00000179278 94 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm28623-201ENSMUST00000187219 192 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm45273-201ENSMUST00000211559 281 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm45860-201ENSMUST00000212700 334 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm9370-201ENSMUST00000222787 609 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm25202-201ENSMUST00000082838 191 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm22293-201ENSMUST00000083314 109 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.22□□□□□ -1.89
Chmp6P0C0A3 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Chmp6P0C0A3 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm3940-201ENSMUST00000105087 432 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm15125-201ENSMUST00000116185 800 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm14518-201ENSMUST00000117351 542 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm15231-201ENSMUST00000119174 447 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm11229-201ENSMUST00000121993 437 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm26027-201ENSMUST00000122725 268 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm24787-201ENSMUST00000157380 123 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm22521-201ENSMUST00000158272 134 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm25490-201ENSMUST00000158734 130 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm28358-202ENSMUST00000189292 223 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm37817-201ENSMUST00000195276 434 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm44274-201ENSMUST00000203417 256 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm18043-201ENSMUST00000216741 739 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm25799-201ENSMUST00000082643 107 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Chmp6P0C0A3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Gm14537-201ENSMUST00000117464 599 ntBASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Gm7299-201ENSMUST00000194441 581 ntBASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Chmp6P0C0A3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm11253-201ENSMUST00000118486 201 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm14517-201ENSMUST00000119040 337 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm14877-201ENSMUST00000119803 478 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm12412-201ENSMUST00000121867 328 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm14578-201ENSMUST00000122166 391 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm13676-201ENSMUST00000122185 591 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm25807-201ENSMUST00000122783 305 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm26277-201ENSMUST00000157097 152 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.19□□□□□ -1.9
Chmp6P0C0A3 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms