Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Best1O88870 Gm21673-201ENSMUST00000186640 436 ntBASIC4.25□□□□□ -1.73
Best1O88870 Gm21135-201ENSMUST00000189023 436 ntBASIC4.25□□□□□ -1.73
Best1O88870 Gm42818-201ENSMUST00000198869 987 ntBASIC4.25□□□□□ -1.73
Best1O88870 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.25□□□□□ -1.73
Best1O88870 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.25□□□□□ -1.73
Best1O88870 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC4.25□□□□□ -1.73
Best1O88870 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Best1O88870 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.25□□□□□ -1.73
Best1O88870 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.25□□□□□ -1.73
Best1O88870 Mir27a-201ENSMUST00000083510 87 ntBASIC4.25□□□□□ -1.73
Best1O88870 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Best1O88870 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Best1O88870 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Best1O88870 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Best1O88870 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.24□□□□□ -1.73
Best1O88870 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Best1O88870 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Best1O88870 Gm12190-201ENSMUST00000120001 187 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm6079-201ENSMUST00000121356 404 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Best1O88870 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC4.24□□□□□ -1.73
Best1O88870 Gm22755-201ENSMUST00000157143 100 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.24□□□□□ -1.73
Best1O88870 Gm25198-201ENSMUST00000178574 110 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Best1O88870 Gm23144-201ENSMUST00000180226 107 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Best1O88870 Gm28299-201ENSMUST00000189908 339 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.24□□□□□ -1.73
Best1O88870 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Best1O88870 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Best1O88870 Gm28211-201ENSMUST00000190920 315 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm17951-201ENSMUST00000198536 496 ntBASIC4.24□□□□□ -1.73
Best1O88870 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.24□□□□□ -1.73
Best1O88870 Gm44465-201ENSMUST00000199536 114 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Best1O88870 Gm19244-201ENSMUST00000204340 253 ntBASIC4.24□□□□□ -1.73
Best1O88870 AC153141.1-201ENSMUST00000218636 501 ntBASIC4.24□□□□□ -1.73
Best1O88870 AC131720.2-201ENSMUST00000220420 431 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm46312-201ENSMUST00000220961 420 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm9818-201ENSMUST00000050900 255 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC4.24□□□□□ -1.73
Best1O88870 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Best1O88870 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Best1O88870 Gm23302-201ENSMUST00000082710 100 ntBASIC4.24□□□□□ -1.73
Best1O88870 Mir383-201ENSMUST00000083523 70 ntBASIC4.24□□□□□ -1.73
Best1O88870 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Best1O88870 Gm14416-201ENSMUST00000118630 2308 ntBASIC4.24□□□□□ -1.73
Best1O88870 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Best1O88870 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Best1O88870 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Best1O88870 Gm37598-201ENSMUST00000194506 1301 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm21032-201ENSMUST00000208108 2578 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Best1O88870 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Best1O88870 Mir105-201ENSMUST00000104655 80 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm14518-201ENSMUST00000117351 542 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm11849-201ENSMUST00000121293 261 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.23□□□□□ -1.73
Best1O88870 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.23□□□□□ -1.73
Best1O88870 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Best1O88870 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Best1O88870 Gm25341-201ENSMUST00000157461 268 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm22211-201ENSMUST00000158097 156 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm17186-201ENSMUST00000171742 456 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm24518-201ENSMUST00000180275 94 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm27999-201ENSMUST00000183539 193 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm27899-201ENSMUST00000184715 64 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm29216-201ENSMUST00000187117 492 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.23□□□□□ -1.73
Best1O88870 Gm10193-201ENSMUST00000188288 231 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm19641-201ENSMUST00000188432 417 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm38150-201ENSMUST00000192996 452 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm42830-201ENSMUST00000196642 313 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Best1O88870 Gm4045-201ENSMUST00000204076 310 ntBASIC4.23□□□□□ -1.73
Best1O88870 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Best1O88870 Gm18462-201ENSMUST00000208112 417 ntBASIC4.23□□□□□ -1.73
Best1O88870 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.23□□□□□ -1.73
Best1O88870 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.23□□□□□ -1.73
Best1O88870 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.23□□□□□ -1.73
Best1O88870 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.23□□□□□ -1.73
Best1O88870 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.23□□□□□ -1.73
Best1O88870 Snord22-201ENSMUST00000083153 126 ntBASIC4.23□□□□□ -1.73
Best1O88870 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Best1O88870 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Best1O88870 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Best1O88870 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Best1O88870 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Best1O88870 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
Best1O88870 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Best1O88870 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Best1O88870 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Best1O88870 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.22□□□□□ -1.73
Best1O88870 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.22□□□□□ -1.73
Best1O88870 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm11398-201ENSMUST00000120330 320 ntBASIC4.22□□□□□ -1.73
Best1O88870 Gm14392-201ENSMUST00000120332 401 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms