Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.9□□□□□ -1.78
Lmx1bO88609 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Lmx1bO88609 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Lmx1bO88609 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Lmx1bO88609 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm12311-201ENSMUST00000118803 374 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm14001-201ENSMUST00000118847 247 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm15142-201ENSMUST00000121013 856 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm14977-201ENSMUST00000121626 812 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm13406-201ENSMUST00000121991 256 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm22378-201ENSMUST00000157481 111 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm25555-201ENSMUST00000158078 111 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm15900-201ENSMUST00000161584 342 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm3191-201ENSMUST00000167139 346 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm20656-201ENSMUST00000176925 518 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm25284-201ENSMUST00000180345 141 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm29097-201ENSMUST00000190273 422 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm44794-201ENSMUST00000206550 411 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.9□□□□□ -1.79
Lmx1bO88609 AC123064.2-201ENSMUST00000217758 193 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm8785-201ENSMUST00000220259 487 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm20102-201ENSMUST00000222445 220 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm10038-201ENSMUST00000077233 441 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Lmx1bO88609 Gm37363-201ENSMUST00000192336 2233 ntBASIC3.9□□□□□ -1.79
Lmx1bO88609 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Lmx1bO88609 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm37195-201ENSMUST00000192006 3018 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lmx1bO88609 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lmx1bO88609 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm15426-201ENSMUST00000117823 556 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm12571-201ENSMUST00000118132 243 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm14804-201ENSMUST00000122322 508 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm10444-201ENSMUST00000126708 148 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm10059-201ENSMUST00000131139 171 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm24441-201ENSMUST00000157235 281 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm22216-201ENSMUST00000157557 114 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm3470-201ENSMUST00000160819 420 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Lmx1bO88609 Mir5134-201ENSMUST00000175529 78 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm28008-201ENSMUST00000184021 186 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm10105-201ENSMUST00000184601 270 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm18505-201ENSMUST00000187360 790 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm28830-201ENSMUST00000188192 213 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm43723-201ENSMUST00000196886 189 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm19147-201ENSMUST00000199622 652 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm4045-201ENSMUST00000204076 310 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm44870-201ENSMUST00000207291 357 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm46138-201ENSMUST00000215294 426 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.89□□□□□ -1.79
Lmx1bO88609 AC117588.2-201ENSMUST00000228340 311 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Mir202-201ENSMUST00000083568 72 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Lmx1bO88609 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lmx1bO88609 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lmx1bO88609 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Lmx1bO88609 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.89□□□□□ -1.79
Lmx1bO88609 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Lmx1bO88609 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Lmx1bO88609 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Lmx1bO88609 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Lmx1bO88609 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms