Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm24382-201ENSMUST00000122698 107 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 Gm16533-201ENSMUST00000140035 228 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Sdc4O35988 Gm24780-201ENSMUST00000157635 143 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 Gm23897-201ENSMUST00000158110 158 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 Gm7281-201ENSMUST00000160010 543 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 Gm25198-201ENSMUST00000178574 110 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Sdc4O35988 Mir8103-201ENSMUST00000183945 107 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.6□□□□□ -1.99
Sdc4O35988 Gm37934-201ENSMUST00000192902 402 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 Gm36997-201ENSMUST00000195090 707 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 Gm35931-201ENSMUST00000203931 448 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Sdc4O35988 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Sdc4O35988 Mir127-201ENSMUST00000093568 70 ntBASIC2.6□□□□□ -1.99
Sdc4O35988 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Sdc4O35988 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Sdc4O35988 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Sdc4O35988 Gm11905-201ENSMUST00000117653 678 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 Gm3835-201ENSMUST00000120752 403 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 Gm24771-201ENSMUST00000158508 137 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Sdc4O35988 Gm16232-201ENSMUST00000162856 167 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Sdc4O35988 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.59□□□□□ -1.99
Sdc4O35988 Mir3103-201ENSMUST00000175474 67 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 Gm38075-201ENSMUST00000191979 920 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.59□□□□□ -1.99
Sdc4O35988 Gm30341-201ENSMUST00000194363 289 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 Gm43115-201ENSMUST00000196244 160 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 Gm22897-201ENSMUST00000197860 128 ntBASIC2.59□□□□□ -1.99
Sdc4O35988 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC2.59□□□□□ -1.99
Sdc4O35988 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC2.59□□□□□ -1.99
Sdc4O35988 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC2.59□□□□□ -1.99
Sdc4O35988 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Sdc4O35988 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Sdc4O35988 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Sdc4O35988 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Sdc4O35988 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Sdc4O35988 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.58□□□□□ -2
Sdc4O35988 Gm24120-201ENSMUST00000103978 129 ntBASIC2.58□□□□□ -2
Sdc4O35988 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
Sdc4O35988 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Sdc4O35988 Gm24274-201ENSMUST00000116787 124 ntBASIC2.58□□□□□ -2
Sdc4O35988 Gm14159-201ENSMUST00000119832 451 ntBASIC2.58□□□□□ -2
Sdc4O35988 Gm25341-201ENSMUST00000157461 268 ntBASIC2.58□□□□□ -2
Sdc4O35988 Gm8580-201ENSMUST00000160295 464 ntBASIC2.58□□□□□ -2
Sdc4O35988 Gm27044-201ENSMUST00000183033 796 ntBASIC2.58□□□□□ -2
Sdc4O35988 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.58□□□□□ -2
Sdc4O35988 Gm19224-201ENSMUST00000190477 793 ntBASIC2.58□□□□□ -2
Sdc4O35988 Gm44256-201ENSMUST00000203304 335 ntBASIC2.58□□□□□ -2
Sdc4O35988 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.58□□□□□ -2
Sdc4O35988 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.58□□□□□ -2
Sdc4O35988 Gm18026-201ENSMUST00000222789 727 ntBASIC2.58□□□□□ -2
Sdc4O35988 Gm4017-201ENSMUST00000084813 338 ntBASIC2.58□□□□□ -2
Sdc4O35988 Gm10794-201ENSMUST00000099624 207 ntBASIC2.58□□□□□ -2
Sdc4O35988 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Sdc4O35988 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.58□□□□□ -2
Sdc4O35988 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.58□□□□□ -2
Sdc4O35988 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
Sdc4O35988 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.57□□□□□ -2
Sdc4O35988 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Sdc4O35988 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
Sdc4O35988 Gm23889-201ENSMUST00000122689 104 ntBASIC2.57□□□□□ -2
Sdc4O35988 Gm25866-201ENSMUST00000158245 112 ntBASIC2.57□□□□□ -2
Sdc4O35988 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC2.57□□□□□ -2
Sdc4O35988 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC2.57□□□□□ -2
Sdc4O35988 Gm23963-201ENSMUST00000179603 77 ntBASIC2.57□□□□□ -2
Sdc4O35988 Trbv7-201ENSMUST00000193339 402 ntBASIC2.57□□□□□ -2
Sdc4O35988 Gm43954-201ENSMUST00000204634 544 ntBASIC2.57□□□□□ -2
Sdc4O35988 Gm19237-201ENSMUST00000205036 1132 ntBASIC2.57□□□□□ -2
Sdc4O35988 Gm45474-201ENSMUST00000209471 408 ntBASIC2.57□□□□□ -2
Sdc4O35988 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.57□□□□□ -2
Sdc4O35988 AC167013.2-202ENSMUST00000227035 333 ntBASIC2.57□□□□□ -2
Sdc4O35988 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
Sdc4O35988 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Sdc4O35988 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
Sdc4O35988 Snord7-201ENSMUST00000083781 97 ntBASIC2.57□□□□□ -2
Sdc4O35988 Gm23847-201ENSMUST00000083829 110 ntBASIC2.57□□□□□ -2
Sdc4O35988 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Sdc4O35988 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Sdc4O35988 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.57□□□□□ -2
Sdc4O35988 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.57□□□□□ -2
Sdc4O35988 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Sdc4O35988 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Sdc4O35988 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.56□□□□□ -2
Sdc4O35988 Gm24358-201ENSMUST00000158424 288 ntBASIC2.56□□□□□ -2
Sdc4O35988 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Sdc4O35988 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.56□□□□□ -2
Sdc4O35988 Gm23633-201ENSMUST00000175293 119 ntBASIC2.56□□□□□ -2
Sdc4O35988 Gm3933-201ENSMUST00000195391 439 ntBASIC2.56□□□□□ -2
Sdc4O35988 Gm44718-201ENSMUST00000206886 359 ntBASIC2.56□□□□□ -2
Sdc4O35988 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.56□□□□□ -2
Sdc4O35988 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms