Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm14359-201ENSMUST00000118883 424 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm14766-201ENSMUST00000121689 367 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm14411-201ENSMUST00000121798 914 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm25784-201ENSMUST00000122524 81 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.7□□□□□ -1.82
Clk3O35492 Gm9498-201ENSMUST00000140849 291 ntBASIC3.7□□□□□ -1.82
Clk3O35492 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Clk3O35492 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Clk3O35492 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Clk3O35492 Gm23152-201ENSMUST00000175322 116 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm20689-201ENSMUST00000176033 279 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm25670-201ENSMUST00000178423 107 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm26239-201ENSMUST00000178842 107 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Clk3O35492 Gm24267-201ENSMUST00000179841 107 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Mir6541-201ENSMUST00000183649 110 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm27845-201ENSMUST00000184479 114 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC3.7□□□□□ -1.82
Clk3O35492 Gm8790-201ENSMUST00000194108 322 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm37732-201ENSMUST00000194377 316 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm43487-201ENSMUST00000200331 1031 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm19649-201ENSMUST00000201126 822 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Clk3O35492 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Clk3O35492 CT010480.1-201ENSMUST00000223612 363 ntBASIC3.7□□□□□ -1.82
Clk3O35492 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Gm24292-201ENSMUST00000082888 107 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Mir19a-201ENSMUST00000083482 82 ntBASIC3.7□□□□□ -1.82
Clk3O35492 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Clk3O35492 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Clk3O35492 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Clk3O35492 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Clk3O35492 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Clk3O35492 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Clk3O35492 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Clk3O35492 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Clk3O35492 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Clk3O35492 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Clk3O35492 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Clk3O35492 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Clk3O35492 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.69□□□□□ -1.82
Clk3O35492 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm14101-201ENSMUST00000121502 473 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm11506-201ENSMUST00000122414 470 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.69□□□□□ -1.82
Clk3O35492 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC3.69□□□□□ -1.82
Clk3O35492 Gm22211-201ENSMUST00000158097 156 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.69□□□□□ -1.82
Clk3O35492 Mir3066-201ENSMUST00000175296 83 ntBASIC3.69□□□□□ -1.82
Clk3O35492 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Clk3O35492 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Clk3O35492 Gm24306-201ENSMUST00000180229 79 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm27718-201ENSMUST00000183721 86 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Mir7074-201ENSMUST00000183884 63 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm28623-201ENSMUST00000187219 192 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm38261-201ENSMUST00000192608 316 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm38044-201ENSMUST00000192964 487 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm37771-201ENSMUST00000193121 265 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm38356-201ENSMUST00000194313 408 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm43853-201ENSMUST00000197162 301 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm8820-201ENSMUST00000204077 571 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm18160-201ENSMUST00000214279 827 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.69□□□□□ -1.82
Clk3O35492 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Clk3O35492 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.69□□□□□ -1.82
Clk3O35492 CT025603.4-201ENSMUST00000225777 413 ntBASIC3.69□□□□□ -1.82
Clk3O35492 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.69□□□□□ -1.82
Clk3O35492 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Clk3O35492 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Clk3O35492 Snora31-201ENSMUST00000083213 130 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm22740-201ENSMUST00000083439 109 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm23503-201ENSMUST00000083903 107 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Clk3O35492 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Clk3O35492 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.69□□□□□ -1.82
Clk3O35492 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Clk3O35492 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.69□□□□□ -1.82
Clk3O35492 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Clk3O35492 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Clk3O35492 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Clk3O35492 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Clk3O35492 Gm15313-201ENSMUST00000119179 282 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Gm12137-201ENSMUST00000119565 346 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Gm12433-201ENSMUST00000119659 255 ntBASIC3.68□□□□□ -1.82
Clk3O35492 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms