Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Nedd9O35177 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm23744-201ENSMUST00000104231 149 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Nedd9O35177 Gm12053-201ENSMUST00000119022 252 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm13737-201ENSMUST00000119793 232 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm14916-201ENSMUST00000121904 204 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm22204-201ENSMUST00000122654 327 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm25294-201ENSMUST00000122791 104 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.48□□□□□ -1.69
Nedd9O35177 Gm24060-201ENSMUST00000157494 95 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm23554-201ENSMUST00000157818 110 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm24745-201ENSMUST00000157840 85 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Nedd9O35177 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Nedd9O35177 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Nedd9O35177 Gm28141-201ENSMUST00000186676 342 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm43804-201ENSMUST00000198280 456 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.48□□□□□ -1.69
Nedd9O35177 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nedd9O35177 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Nedd9O35177 Gm23345-201ENSMUST00000083817 150 ntBASIC4.48□□□□□ -1.69
Nedd9O35177 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nedd9O35177 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Nedd9O35177 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Nedd9O35177 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm22269-201ENSMUST00000104002 130 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm24374-201ENSMUST00000104394 106 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nedd9O35177 Gm14714-201ENSMUST00000119743 439 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm12739-201ENSMUST00000119769 382 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm5391-201ENSMUST00000121155 613 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm12578-201ENSMUST00000121244 417 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.47□□□□□ -1.69
Nedd9O35177 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.47□□□□□ -1.69
Nedd9O35177 Gm25335-201ENSMUST00000158043 103 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm24810-201ENSMUST00000175317 70 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm6214-201ENSMUST00000178845 541 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Npn2-202ENSMUST00000189275 235 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.47□□□□□ -1.69
Nedd9O35177 Gm28098-201ENSMUST00000191361 699 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm37817-201ENSMUST00000195276 434 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Igkv15-97-201ENSMUST00000197637 339 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm19908-201ENSMUST00000204684 391 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm44871-201ENSMUST00000207821 497 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.47□□□□□ -1.69
Nedd9O35177 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Nedd9O35177 Gm6462-201ENSMUST00000081488 304 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm26128-201ENSMUST00000083170 110 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Mir28a-201ENSMUST00000083560 86 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Nedd9O35177 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.47□□□□□ -1.69
Nedd9O35177 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Nedd9O35177 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.47□□□□□ -1.69
Nedd9O35177 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Nedd9O35177 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Nedd9O35177 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
Nedd9O35177 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Nedd9O35177 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.69
Nedd9O35177 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Nedd9O35177 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Nedd9O35177 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Nedd9O35177 Gm26396-201ENSMUST00000104093 132 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm22656-201ENSMUST00000104199 171 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Nedd9O35177 Gm22195-201ENSMUST00000116861 108 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm22032-201ENSMUST00000116946 116 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm25177-201ENSMUST00000122634 117 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Nedd9O35177 Gm14364-201ENSMUST00000129209 267 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm23957-201ENSMUST00000157209 90 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm22816-201ENSMUST00000157450 117 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm26187-201ENSMUST00000157693 101 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm26092-201ENSMUST00000179798 97 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Mir669a-1-201ENSMUST00000180238 97 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm27028-201ENSMUST00000182303 399 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Mir6537-201ENSMUST00000184150 110 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm29320-201ENSMUST00000185235 615 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm29179-202ENSMUST00000186138 615 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm29134-201ENSMUST00000186579 126 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm29448-201ENSMUST00000186675 615 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm29314-201ENSMUST00000186800 615 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm28255-201ENSMUST00000187101 694 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.46□□□□□ -1.7
Nedd9O35177 Gm28253-202ENSMUST00000187971 615 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.46□□□□□ -1.7
Nedd9O35177 Gm29169-201ENSMUST00000189835 615 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm28241-201ENSMUST00000190916 235 ntBASIC4.46□□□□□ -1.7
Nedd9O35177 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.46□□□□□ -1.7
Nedd9O35177 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms