Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm6510-201ENSMUST00000195916 574 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm44468-201ENSMUST00000199516 105 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm40692-201ENSMUST00000220411 491 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gm23851-201ENSMUST00000083831 103 ntBASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim55G3X8Y1 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.65□□□□□ -1.66
Trim55G3X8Y1 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.65□□□□□ -1.66
Trim55G3X8Y1 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.65□□□□□ -1.66
Trim55G3X8Y1 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.65□□□□□ -1.66
Trim55G3X8Y1 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.65□□□□□ -1.66
Trim55G3X8Y1 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm26387-201ENSMUST00000104238 132 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm12255-201ENSMUST00000117184 284 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm14823-201ENSMUST00000117698 238 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm15357-201ENSMUST00000119160 285 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm15364-201ENSMUST00000119618 585 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm15745-201ENSMUST00000119807 115 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm13132-201ENSMUST00000121194 472 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm12685-201ENSMUST00000121702 214 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm23957-201ENSMUST00000157209 90 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm24857-201ENSMUST00000158061 310 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm7925-201ENSMUST00000166690 401 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm27457-201ENSMUST00000184771 156 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm38167-201ENSMUST00000195704 1178 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm33952-201ENSMUST00000197795 408 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm43669-201ENSMUST00000198229 436 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm2011-203ENSMUST00000203750 435 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm44852-201ENSMUST00000207950 369 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Mir449a-201ENSMUST00000083641 91 ntBASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trim55G3X8Y1 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms