Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm13751-201ENSMUST00000120280 752 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.75□□□□□ -1.97
Chd3B1AR17 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Chd3B1AR17 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC2.75□□□□□ -1.97
Chd3B1AR17 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm21139-201ENSMUST00000186594 877 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm37417-201ENSMUST00000195257 454 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm18327-201ENSMUST00000202426 830 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm44718-201ENSMUST00000206886 359 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm7588-201ENSMUST00000216866 571 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC2.75□□□□□ -1.97
Chd3B1AR17 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Chd3B1AR17 Gm22970-201ENSMUST00000083304 186 ntBASIC2.75□□□□□ -1.97
Chd3B1AR17 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Chd3B1AR17 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Chd3B1AR17 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Chd3B1AR17 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Chd3B1AR17 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Mir878-201ENSMUST00000104680 78 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Gm15103-201ENSMUST00000119893 871 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Gm22600-201ENSMUST00000157598 269 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Mir7017-201ENSMUST00000184894 62 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Gm35931-201ENSMUST00000203931 448 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Gm44844-201ENSMUST00000207242 336 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Gm10025-201ENSMUST00000079568 372 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Chd3B1AR17 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.74□□□□□ -1.97
Chd3B1AR17 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Chd3B1AR17 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
Chd3B1AR17 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.74□□□□□ -1.97
Chd3B1AR17 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm23048-201ENSMUST00000157237 129 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm25341-201ENSMUST00000157461 268 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm19203-201ENSMUST00000174049 939 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm24816-201ENSMUST00000175311 151 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm37533-201ENSMUST00000193848 545 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm17967-201ENSMUST00000195319 647 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm43600-201ENSMUST00000202134 223 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 AC154851.2-201ENSMUST00000222172 644 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Chd3B1AR17 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Chd3B1AR17 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm11446-201ENSMUST00000121319 866 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm25153-201ENSMUST00000157118 156 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm23467-201ENSMUST00000157127 159 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm25476-201ENSMUST00000175125 185 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Mir3076-201ENSMUST00000175415 60 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm25360-201ENSMUST00000178786 191 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm9892-201ENSMUST00000182415 992 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Mir6386-201ENSMUST00000183558 104 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm37616-201ENSMUST00000193974 322 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm45380-201ENSMUST00000210465 315 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.73□□□□□ -1.97
Chd3B1AR17 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.73□□□□□ -1.97
Chd3B1AR17 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Chd3B1AR17 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Chd3B1AR17 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm14939-201ENSMUST00000120347 680 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm24601-201ENSMUST00000157970 143 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm26585-201ENSMUST00000180890 630 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm19177-201ENSMUST00000204520 613 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm7846-201ENSMUST00000145844 274 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Chd3B1AR17 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm38329-201ENSMUST00000193473 427 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm8249-201ENSMUST00000219225 465 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm5374-201ENSMUST00000222868 657 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Diaph3-206ENSMUST00000226745 713 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
Chd3B1AR17 Gm9762-201ENSMUST00000036976 444 ntBASIC2.72□□□□□ -1.97
Chd3B1AR17 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms