Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Gm44059-201ENSMUST00000204048 351 ntBASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Gm44634-201ENSMUST00000206119 152 ntBASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Gm7407-201ENSMUST00000208301 568 ntBASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.17□□□□□ -1.9
H2afb2S4R1M3 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Mir421-201ENSMUST00000083575 76 ntBASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.17□□□□□ -1.9
H2afb2S4R1M3 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Gm7171-201ENSMUST00000177413 1349 ntBASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
H2afb2S4R1M3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm11488-201ENSMUST00000117277 863 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm12458-201ENSMUST00000119387 495 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm12755-201ENSMUST00000122297 282 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm26020-201ENSMUST00000122729 183 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm23028-201ENSMUST00000158773 265 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm24666-201ENSMUST00000158937 167 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm15946-201ENSMUST00000160654 423 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm3102-201ENSMUST00000164236 489 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm17064-201ENSMUST00000167690 452 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm44135-201ENSMUST00000205221 368 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm45814-201ENSMUST00000212646 775 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 AC111046.1-201ENSMUST00000217715 412 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm9628-201ENSMUST00000222169 725 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 AC154506.3-201ENSMUST00000225417 213 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm25582-201ENSMUST00000083412 110 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Olfr203-201ENSMUST00000089305 924 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
H2afb2S4R1M3 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
H2afb2S4R1M3 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
H2afb2S4R1M3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
H2afb2S4R1M3 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
H2afb2S4R1M3 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
H2afb2S4R1M3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
H2afb2S4R1M3 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
H2afb2S4R1M3 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
H2afb2S4R1M3 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm13731-201ENSMUST00000117332 196 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm15854-201ENSMUST00000118879 808 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm15799-201ENSMUST00000120899 289 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm22208-201ENSMUST00000122658 110 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm26866-201ENSMUST00000180414 802 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm27659-201ENSMUST00000183472 98 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Mir6393-201ENSMUST00000183709 94 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm18727-201ENSMUST00000185981 553 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm28925-201ENSMUST00000188586 168 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm6112-201ENSMUST00000208037 629 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 AC183092.2-201ENSMUST00000225542 1153 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
H2afb2S4R1M3 Gm22245-201ENSMUST00000082479 103 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms