Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm5731-201ENSMUST00000190969 481 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm37343-201ENSMUST00000192542 111 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm42465-201ENSMUST00000197036 492 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm5983-201ENSMUST00000197739 770 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm42438-201ENSMUST00000197832 974 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm44266-201ENSMUST00000205235 500 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm45146-201ENSMUST00000207108 221 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm17991-201ENSMUST00000208139 297 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm18602-201ENSMUST00000209794 851 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm26121-201ENSMUST00000083364 162 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
H2afb1S4R1E0 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Snord66-201ENSMUST00000104051 75 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm22591-201ENSMUST00000104243 106 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm13567-201ENSMUST00000118026 247 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm12102-201ENSMUST00000118251 604 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm14669-201ENSMUST00000118841 250 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm14687-201ENSMUST00000120206 363 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm12884-201ENSMUST00000120371 325 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm13973-201ENSMUST00000121371 894 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm24244-201ENSMUST00000157317 130 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm25334-201ENSMUST00000158036 110 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm26991-201ENSMUST00000180950 620 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm28146-201ENSMUST00000185517 701 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm29576-201ENSMUST00000188020 678 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm28552-201ENSMUST00000190725 388 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm28354-201ENSMUST00000190904 678 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm29389-201ENSMUST00000191562 352 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm36934-201ENSMUST00000192007 306 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm43171-201ENSMUST00000199882 291 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm6929-201ENSMUST00000210930 468 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm18120-201ENSMUST00000220079 511 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm3829-201ENSMUST00000222362 619 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 AC109172.1-201ENSMUST00000227503 187 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Gm12582-201ENSMUST00000030555 697 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Snord15a-201ENSMUST00000083888 148 ntBASIC3.23□□□□□ -1.89
H2afb1S4R1E0 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm15176-201ENSMUST00000117734 135 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm11219-201ENSMUST00000118565 358 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm9119-201ENSMUST00000118866 495 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm13627-201ENSMUST00000119700 706 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm16458-201ENSMUST00000121428 502 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm22501-201ENSMUST00000158981 127 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm16290-201ENSMUST00000161175 474 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm20773-201ENSMUST00000178940 681 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm29550-201ENSMUST00000185543 285 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm17838-201ENSMUST00000205872 876 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm45814-201ENSMUST00000212646 775 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 Gm46146-201ENSMUST00000217483 346 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
H2afb1S4R1E0 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 AC130823.2-201ENSMUST00000226169 290 ntBASIC3.22□□□□□ -1.89
H2afb1S4R1E0 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms