Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm12112-201ENSMUST00000117772 231 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm15213-201ENSMUST00000122098 216 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm5353-201ENSMUST00000139800 793 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm6969-201ENSMUST00000140065 342 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm5699-201ENSMUST00000152491 723 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm22598-201ENSMUST00000157600 127 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm25865-201ENSMUST00000158247 104 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm26501-201ENSMUST00000178307 107 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm9134-201ENSMUST00000193186 551 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm42925-201ENSMUST00000197359 285 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm18540-201ENSMUST00000204025 526 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm44059-201ENSMUST00000204048 351 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm44446-201ENSMUST00000204864 255 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm4987-201ENSMUST00000078326 408 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm22974-201ENSMUST00000083301 103 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Gm23845-201ENSMUST00000083834 152 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.58□□□□□ -1.52
Prpf40aQ9R1C7 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm26147-201ENSMUST00000104479 114 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm7657-201ENSMUST00000118851 666 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm14627-201ENSMUST00000118931 567 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm12042-201ENSMUST00000120479 301 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm5379-201ENSMUST00000120973 826 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm23000-201ENSMUST00000157083 139 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm25655-201ENSMUST00000158465 290 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Mir6400-201ENSMUST00000184870 92 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm42570-201ENSMUST00000195937 292 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm42453-201ENSMUST00000200477 409 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm44776-201ENSMUST00000207212 381 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm45185-201ENSMUST00000207556 404 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm45815-201ENSMUST00000220241 146 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Prpf40aQ9R1C7 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Mir701-201ENSMUST00000102208 109 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm25919-201ENSMUST00000104271 132 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm11804-201ENSMUST00000121663 468 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm22725-201ENSMUST00000158092 110 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Mir3110-201ENSMUST00000175053 80 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm27528-201ENSMUST00000183544 205 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm28385-201ENSMUST00000185671 292 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm28288-201ENSMUST00000191019 214 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm45434-201ENSMUST00000210550 293 ntBASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Prpf40aQ9R1C7 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms