Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm44600-201ENSMUST00000208540 111 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm25205-201ENSMUST00000082841 103 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm25792-201ENSMUST00000083289 100 ntBASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trem1Q9JKE2 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm14554-201ENSMUST00000119548 661 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm14600-201ENSMUST00000121032 630 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm23463-201ENSMUST00000122468 99 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm25913-201ENSMUST00000157617 135 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm24240-201ENSMUST00000157785 135 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm27033-201ENSMUST00000183226 544 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Mir6372-201ENSMUST00000185114 109 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm29259-201ENSMUST00000186396 694 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm29576-201ENSMUST00000188020 678 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm28354-201ENSMUST00000190904 678 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm20203-201ENSMUST00000192352 332 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm42832-201ENSMUST00000196361 745 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm43393-201ENSMUST00000200147 194 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm23932-201ENSMUST00000082914 107 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Snord15a-201ENSMUST00000083888 148 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Gm42534-201ENSMUST00000196063 1754 ntBASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.89□□□□□ -1.95
Trem1Q9JKE2 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm24469-201ENSMUST00000104487 131 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm11393-201ENSMUST00000118019 288 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm13076-201ENSMUST00000118041 204 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm11490-201ENSMUST00000118128 272 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm9308-201ENSMUST00000119073 448 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm15026-201ENSMUST00000119219 458 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm14940-201ENSMUST00000119309 495 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Snrpert-201ENSMUST00000121967 279 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm16274-201ENSMUST00000139251 592 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm23671-201ENSMUST00000157472 103 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm25386-201ENSMUST00000157814 288 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Mir6338-201ENSMUST00000183389 109 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Mir6411-201ENSMUST00000183556 108 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm8296-201ENSMUST00000185597 524 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm29192-201ENSMUST00000190942 377 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm38075-201ENSMUST00000191979 920 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm18982-201ENSMUST00000198118 529 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm44208-201ENSMUST00000205199 421 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm7422-201ENSMUST00000220115 640 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 CT030242.2-201ENSMUST00000221588 148 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trem1Q9JKE2 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Trem1Q9JKE2 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms