Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm16383-201ENSMUST00000118122 232 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm14795-201ENSMUST00000118461 471 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm14627-201ENSMUST00000118931 567 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm14159-201ENSMUST00000119832 451 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm6591-201ENSMUST00000121063 434 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm16458-201ENSMUST00000121428 502 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm13676-201ENSMUST00000122185 591 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm24681-201ENSMUST00000158760 107 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm24082-201ENSMUST00000175175 83 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm37288-201ENSMUST00000193963 334 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm42818-201ENSMUST00000198869 987 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm43991-201ENSMUST00000203751 274 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm44118-201ENSMUST00000204665 229 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm46194-201ENSMUST00000218136 320 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 AC151730.2-201ENSMUST00000224027 475 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trem3Q9JKE1 Gm24376-201ENSMUST00000104399 127 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm25728-201ENSMUST00000104525 159 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm13504-201ENSMUST00000117490 316 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm15382-201ENSMUST00000118011 537 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm12617-201ENSMUST00000121268 381 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm11819-201ENSMUST00000122192 372 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm22839-201ENSMUST00000158436 304 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm23312-201ENSMUST00000158774 102 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm28802-201ENSMUST00000188624 944 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm17967-201ENSMUST00000195319 647 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm45513-201ENSMUST00000210228 376 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm24446-201ENSMUST00000083982 156 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.18□□□□□ -2.06
Trem3Q9JKE1 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm25097-201ENSMUST00000104042 145 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm15988-201ENSMUST00000118677 367 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm7071-201ENSMUST00000120458 462 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm7209-201ENSMUST00000122339 333 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm24787-201ENSMUST00000157380 123 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm25902-201ENSMUST00000158493 318 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Mir5112-201ENSMUST00000174897 60 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm6900-201ENSMUST00000178971 342 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm29553-201ENSMUST00000189692 279 ntBASIC2.17□□□□□ -2.06
Trem3Q9JKE1 Gm42593-201ENSMUST00000198469 377 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms