Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm45031-201ENSMUST00000206800 288 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm45245-201ENSMUST00000210082 376 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm45316-201ENSMUST00000210128 162 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm19219-201ENSMUST00000215863 724 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm8249-201ENSMUST00000219225 465 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm8274-201ENSMUST00000219820 463 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm25008-201ENSMUST00000083809 81 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.11□□□□□ -1.75
Trim54Q9ERP3 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.11□□□□□ -1.75
Trim54Q9ERP3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Mir466f-2-201ENSMUST00000104805 94 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm15994-201ENSMUST00000118029 402 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm15060-201ENSMUST00000119550 948 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm8757-201ENSMUST00000119660 372 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm23167-201ENSMUST00000157155 103 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm23540-201ENSMUST00000157543 164 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm24532-201ENSMUST00000157951 286 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm25369-201ENSMUST00000158848 132 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Mir6938-201ENSMUST00000184173 63 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm27163-201ENSMUST00000184767 409 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm7182-201ENSMUST00000193351 732 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm7946-201ENSMUST00000203326 958 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm44720-201ENSMUST00000206076 260 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm46194-201ENSMUST00000218136 320 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 AC164297.5-201ENSMUST00000224365 198 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 AC110380.1-201ENSMUST00000226987 389 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 AC129208.2-201ENSMUST00000228506 320 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Mir193a-201ENSMUST00000083461 66 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim54Q9ERP3 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm13273-201ENSMUST00000119737 159 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm11410-201ENSMUST00000120053 1143 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm6079-201ENSMUST00000121356 404 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm22219-201ENSMUST00000157562 319 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm26045-201ENSMUST00000157862 97 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm6680-201ENSMUST00000192789 950 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm8023-201ENSMUST00000195298 903 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm43039-201ENSMUST00000202883 963 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Snord21-201ENSMUST00000082519 94 ntBASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim54Q9ERP3 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Trim54Q9ERP3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Trim54Q9ERP3 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Trim54Q9ERP3 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm24987-201ENSMUST00000104453 134 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm13239-201ENSMUST00000119920 637 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm14875-201ENSMUST00000120881 319 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm13602-201ENSMUST00000122405 493 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm23538-201ENSMUST00000157535 101 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Gm22076-201ENSMUST00000158601 84 ntBASIC4.08□□□□□ -1.76
Trim54Q9ERP3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms