Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm44054-201ENSMUST00000203814 372 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm44032-201ENSMUST00000204841 166 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm44600-201ENSMUST00000208540 111 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 CT025536.1-201ENSMUST00000226744 844 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm43320-201ENSMUST00000196047 2916 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.18□□□□□ -1.58
Upf1Q9EPU0 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm14421-201ENSMUST00000121755 1958 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm14299-201ENSMUST00000117586 397 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm12806-201ENSMUST00000119384 268 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm11229-201ENSMUST00000121993 437 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm25339-201ENSMUST00000157458 232 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm25361-201ENSMUST00000179358 76 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm27640-201ENSMUST00000184580 147 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Mir7116-201ENSMUST00000195956 70 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm43723-201ENSMUST00000196886 189 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm43028-201ENSMUST00000202561 481 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm44060-201ENSMUST00000204440 410 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm24460-201ENSMUST00000082731 106 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm17969-201ENSMUST00000185706 2557 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Upf1Q9EPU0 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm43259-201ENSMUST00000198446 3277 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm25111-201ENSMUST00000116686 147 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm11798-201ENSMUST00000119150 421 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm12412-201ENSMUST00000121867 328 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm16353-201ENSMUST00000159458 1223 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm17119-201ENSMUST00000163943 280 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm25243-201ENSMUST00000174912 207 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Mir5098-201ENSMUST00000175320 82 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm26189-201ENSMUST00000179879 107 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm29704-201ENSMUST00000196011 253 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm5322-201ENSMUST00000206142 699 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm44870-201ENSMUST00000207291 357 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm45387-201ENSMUST00000209792 632 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 AC154603.1-201ENSMUST00000224355 313 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Olfr895-201ENSMUST00000093864 951 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Upf1Q9EPU0 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Upf1Q9EPU0 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.15□□□□□ -1.58
Upf1Q9EPU0 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Upf1Q9EPU0 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Upf1Q9EPU0 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
Upf1Q9EPU0 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Upf1Q9EPU0 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms