Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.92□□□□□ -1.94
Cdc40Q9DC48 AL645546.2-201ENSMUST00000224526 265 ntBASIC2.92□□□□□ -1.94
Cdc40Q9DC48 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.92□□□□□ -1.94
Cdc40Q9DC48 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Gm25004-201ENSMUST00000083811 161 ntBASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Cdc40Q9DC48 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Gm12268-201ENSMUST00000118398 442 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Gm12889-201ENSMUST00000118684 241 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Gm12156-201ENSMUST00000119188 554 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Gm4761-201ENSMUST00000178086 582 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Gm18727-201ENSMUST00000185981 553 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Gm44274-201ENSMUST00000203417 256 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Gm7624-201ENSMUST00000209702 435 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Gm7751-201ENSMUST00000212868 709 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Cdc40Q9DC48 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Cdc40Q9DC48 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Cdc40Q9DC48 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.9□□□□□ -1.94
Cdc40Q9DC48 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.9□□□□□ -1.94
Cdc40Q9DC48 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm649-201ENSMUST00000117284 1054 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm12492-201ENSMUST00000117665 564 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm15037-201ENSMUST00000120358 259 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm6113-201ENSMUST00000180319 639 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm27783-201ENSMUST00000183534 105 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Npn2-202ENSMUST00000189275 235 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm43954-201ENSMUST00000204634 544 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm44030-201ENSMUST00000204865 432 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm25799-201ENSMUST00000082643 107 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gm22970-201ENSMUST00000083304 186 ntBASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Cdc40Q9DC48 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Gm25407-201ENSMUST00000104102 134 ntBASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Gm13761-201ENSMUST00000117238 807 ntBASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Gm12149-201ENSMUST00000117511 654 ntBASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Gm16017-201ENSMUST00000119834 208 ntBASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Gm13717-201ENSMUST00000119868 365 ntBASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Gm14162-201ENSMUST00000121985 601 ntBASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Gm8840-201ENSMUST00000122454 386 ntBASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.89□□□□□ -1.95
Cdc40Q9DC48 Mir6401-201ENSMUST00000184499 109 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms